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Name : clpC (BBR47_01880) Accession : YP_002769669.1 Strain : Brevibacillus brevis NBRC 100599 Genome accession: NC_012491 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 201381 - 203828 bp Length : 2448 bp Strand : + Note : - DNA sequence : ATGTTTGGACGTTTTACAGAACGCGCACAAAAAGTACTGGCGCTTGCCCTGGAAGAGGCGGTTCGTCTCGGACACAAAGA TATTGGGACAGAGCATGTGCTGCTGGGACTCATTCGAGAAGGCGAAGGAATTGCGGCGAAGGCACTGCAATCACTTGGGC TTGGCCTCGATAAAATCCAGAGTGAAGTGGAGTCGTTAATCGGGCGAGGAACAGAGCAGTCCGGTAGTAATTACACACCA AACTATACACCTCGCGCCAAAAAGGTCATTGAACTGTCGATGGACGAAGCCCGCAAGCTGGGTCATACCTATGTGGGGAC TGAACATATTCTGCTTGGCTTGATCCGTGAGGGAGAAGGCATTGCTGCGAGAATCATGAACAATTTGGGCGTTAGCCTGA ACAAGGCACGGCAACAGGTGCTCCAGCTGCTGGGCAGCTCGGAAATGATGGCATCTCATCAACCGTCTGGAGGGAATCCA GCGGCGAATACGCCGACATTGGACGGCTTGGCAAGGGATCTGACTGCAATCGCTCGTGACGGCGGTCTGGACCCGGTTAT CGGTCGCCAAAAAGAAATCGAGCGTGTGATCCAAGTACTTAGCAGACGTACCAAGAACAACCCTGTTTTAATTGGGGAGC CTGGTGTCGGGAAAACAGCTATCGCAGAAGGTCTTGCCCAAAAAATCGTGAACAACGAAATTCCGGAGACCCTTCGTGAT AAGCGCGTCATGACCCTCGATATGGGAACCGTTGTTGCGGGAACCAAATATCGCGGTGAGTTCGAAGATCGTCTGAAAAA AATCATGGACGAAATTCGCCAAGCAGGAAACATCATCCTGTTTATTGATGAGCTGCACACCCTGATTGGTGCTGGTGGAG CAGAAGGCGCAATTGACGCCTCTAACATTTTGAAGCCTGCGCTGGCTCGTGGTGAGCTACAGTGCGTAGGTGCTACAACG CTGGATGAATATCGCAAGTACATCGAAAAAGACGCGGCACTGGAGCGTCGTTTCCAACCGATTCAGGTTGATGAACCGAC AGCGGAGGATGCCATTCGTATCCTGCATGGCCTTCGTGATCGTTATGAAGCCCACCACCGTGTCAAAATTACCGATGAAG CAATCGAGCAGGCAGTAAAGCTGTCTGACCGCTATATTACGGAACGCTTCCTGCCTGACAAGGCCATCGACTTGGTTGAC GAGGCGGCATCGAAAGTCCGCTTGCAATCCTTTACCGTTCCGCCAAACCTCAAAGAGCTGGAGGGACGTCTGGAAGAGGT GCGCAAGGAAAAAGACGCTGCCGTACAATCACAAGAGTTCGAGGAAGCAGCAGCACTTCGCGATCAGGAGCAAAAACTGC GTGAAGAACTGGATAAAACGAAAAAAGACTGGAAAGAACGCCAAGGCCAGCTGAACATGGAGGTTACGCCAGAAGACATC GCGCAAGTAGTGGCGAGCTGGACGGGTATTCCTGTGTTAAAGCTGAAGGAAGAAGAAACAGAGCGCTTGTTGAAGATGGA AGAGATTTTGCACGATCGCGTTATTGGTCAAGATGAAGCAGTCAAATCCATTTCGCGTGCGATCCGCCGTGCCCGTGCTG GTTTGAAAGACCCAAAACGCCCAATCGGCTCGTTTATCTTCCTGGGGCCTACCGGTGTGGGTAAAACCGAATTGGCTCGT GCCGTGGCGGAGACGCTTTTCGGTGACGAGGATGCCATGATCCGCGTGGATATGTCCGAGTACATGGAGAAGCATTCCAC CGCTCGTCTGGTAGGTGCCCCTCCAGGCTACGTAGGCTTTGACGAGGGCGGTCAGCTGACCGAAAAAGTGCGCCGTAAGC CTTACTCCGTCATTTTACTGGACGAAATCGAGAAAGCTCACCCAGACGTATTCAACATCCTGCTACAAGTTCTGGATGAT GGTCGTTTGACAGACTCCAAGGGACGTACCGTCGACTTCCGCAATACGGTTGTCATCATGACTTCCAACGTCGGAGCCAG CATGATCAAGAAAAATACAACGCTCGGCTTCACGACCAATGATTCGGAAAGAAAGTATCAGGATATGAAGGACAAAGTCA TGGATGAGCTGAAGAAGAGCTTCCGTCCTGAGTTCTTGAACCGTATCGACGAAGTCATCGTGTTCCACTCCTTGGAGCAA GAGCATATCGAGCAAATCGTAACTCTCATGACAGATGAGCTGCGTAAACGTTTGAAAGAGCAGGACATTGATTTCCAATT GACCGAAGAAGCCAAGAAAGTATTGGCAAAAGAAGGCTTTGATCCGGCCTATGGTGCACGTCCTCTGCGTCGAGCTATCC AGCGCCACATCGAGGATAATTTGTCCGAGGAATTGCTCAAGGGCACGATCAGTAAAGGCGATACCGTCAATATCGAAGCG GAAGAAGGCAAGCTGGTAGTCAAGCGCCTTGAAAAAACGAAATCATAA Protein sequence : MFGRFTERAQKVLALALEEAVRLGHKDIGTEHVLLGLIREGEGIAAKALQSLGLGLDKIQSEVESLIGRGTEQSGSNYTP NYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGVSLNKARQQVLQLLGSSEMMASHQPSGGNP AANTPTLDGLARDLTAIARDGGLDPVIGRQKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRD KRVMTLDMGTVVAGTKYRGEFEDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATT LDEYRKYIEKDAALERRFQPIQVDEPTAEDAIRILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYITERFLPDKAIDLVD EAASKVRLQSFTVPPNLKELEGRLEEVRKEKDAAVQSQEFEEAAALRDQEQKLREELDKTKKDWKERQGQLNMEVTPEDI AQVVASWTGIPVLKLKEEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR AVAETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLDD GRLTDSKGRTVDFRNTVVIMTSNVGASMIKKNTTLGFTTNDSERKYQDMKDKVMDELKKSFRPEFLNRIDEVIVFHSLEQ EHIEQIVTLMTDELRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGARPLRRAIQRHIEDNLSEELLKGTISKGDTVNIEA EEGKLVVKRLEKTKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-91 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_002769669.1 | negative regulator of genetic competence | VFG0079 | Protein | 0.0 | 74 |
| clpC | YP_002769669.1 | negative regulator of genetic competence | VFG0080 | Protein | 1e-148 | 51 |
