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Name : RER_00710 (RER_00710) Accession : YP_002763518.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : probable lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 88616 - 91930 bp Length : 3315 bp Strand : - Note : protein synonym:LysRS; protein synonym:lysine--tRNA ligase DNA sequence : GTGGAATCGCCACCCGAAAATCCGCGCCAGGCGCGGCGATTCCGCAAAGGGCGGTTCAGCCAGGTTCCCCATATCTCGGG ATTGATCCTCGGAGTTTTCTCCGTACTGGTGTTCCTGTGGAGCATCTCGCCGGTTCTGCGGCACATCCTCCGCGTCCCAC GCGAATACATCGACAGCTACTACTTCGACGCACCGGATACGAGCCTGTCGTGGGCGCTCGTCGTCGCCCTGCTCGCCGCG GCCCTCGCGAGTCGCAAGCGCATCGCCTGGTGGCTGCTGACGATCTACCTCGCGCTGATCACCCTCACCAACATCGCCTC CACGATCGTCGACAAGAACCCGAACAACGCCGTCGCCGCTGTCGTTTTGCTTGTCGTGATCGGAATCCTCATCGCCGCGA GGCCCGAGTTCTACACACGCGTACGACGCGGCGCCGGTTGGAAAGCGCTCGGCGTACTGATCGGCGGCATGGCTGTCGCG ACCGTGATCGGTTGGGGCCTTGTCGAACTCTTCCCGGGCGACCTGCCGCAGAACCAACGATTCCTCTGGGCCCTGAACCG CGTCACCGCGGCGGCTTCGGTCGACAACGAGGTGTTCGACGGCCACCCACGCGTCTTCGTCAACACGGTCCTCGGTCTCC TCGGCGCCATCGCACTACTCGCCGCCGTTATGACGCTCTTCCGCGCGCAACGCTCCAACAACGCCCTCACCGGAAACGAC GAGTCCGCGATCCGCGGGTTGATCCAGAACTTCGGCGCCGACGACTCCCTCGCTTACTTCGCCACCCGCCGCGACAAGGC CGTCATCTTCGCGCCGAGCGGCAAGGCCGCGATCACGTACCGCGTCGAGATCGGCGTCTGCCTCGCCAGTGGTGATCCCA TCGGCGATCCCGAGGCGTGGCCGCACGCCATCGAAGCGTGGCAGGACCTGGCCTCGCAGTACGGCTGGGCGACAGCCGTC ATGGGCGCCAGCGAAACCGGGGCGACGGCGTACAAGAAGGCAGGCTTGAGCGTCCTGCAACTCGGCGACGAAGCGATCCT GCGCACCCGCGAGTTCAACCTCAACGGACGCGACATGCGCCCGGTACGCCAGGCCGTCACCCGCGTCAGGCGCCACGGCG TCACCGTGCGGATGCGACGCCATCGCGACATCCCGCCCGAGGACATGGCGGCCGTCATCATCCGCGCGGACGACTGGCGT GACACCGACACCGAGCGCGGCTTCTCCATGGCGCTCGGCCGACTGGGCGATCACCTCGACGGCGACTGCCTCCTCGTCGA AGCCGTCATGGGCGAAGGCACGGAGGACGAAAGCGTCGTCGGCATGCTTTCGCTCGTGCCGTGGGGACCGAACGGCGTTT CGCTCGACCTGATGCGCCGTAAGCCGACGGCGCCCAACGGTGTCGTCGAATTGATGGTCTCGGAGTTGGCCACACGTTCG GACGAGATCGGCGTCGTGCGGGTCTCGCTCAACTTCGCCGTCTTCCGCTCGGTGTTCGAGGAAGGTTCGCGCATCGGCGC CGGCCCGATCCTCCGCATCTGGCGCTCGGTGCTCGTCTTCTTCTCCCGCTGGTGGCAGCTCGAAGCGCTGTACCGCTCGA ACGTGAAGTACCAGCCGGATTGGGAGCCGCGTTTTCTCTGCTTCGAGGACAACCGTGAGCTTCCACGCGTCGGATTCGCG TCGGCCATCGCCGAAGGCTTTGTGGTTCTGCCCAGTTTCGGACGCAAGTCGAGCCAGGTCGTCAAGCACACCGGAACACA TGCGGCGGTGCCGGCAGCTCTGGTGACTTCCGAAGGACTGCACGCCGACGGCAGCCCGCCGGACTCGGCGCCGTCGTTCA CGACCAACGGTCCGCGTCGACCCGAGCAGGTCCGGGTGCGCATGAACAAACTTGCGCAACTGGCCGACGAAGGAATCGCC GCCTACCCCGTCGCCTATCCGCCGACGCATACGATCGCGGCCGCAGCGAAGTCGCCGGAGGGCACCCGCGTACGCATCGC GGGACGCCTGCTGAGGGTTCGCGACTACGGCGGAGTCGTGTTCACGGACGTGCGCGACTGGTCCGGCGACATCCAGGTTC TGGTCGACCAGGACAACGTCGGCCGCGAGAAGTTGGCGGAGTTCGCTGCCGAATTCGATCTCGGTGACCTGATCGAAGTG AGCGGAACCATCGGGCGCAGCCGCAAGGGCGAGCTGTCGCTCATCGCCGTCGAGTGGCGCATGAACGGCAAGTGCCTGCA CCCGCTGCCGGACAAGTGGAAGGGCCTCTCGGATCCCGAGACCCGAGTCCGCCAGCGGTACCTCGACATCGCCCTCAACC CGAAGGCCCGCGAACTGCTCGAAGCTCGAAGTGCCGTCGTGAAGTCGCTTCGCGATTCACTCGGTGGTCGCGGATACCTC GAAGTCGAGACCCCGATCCTGCAGCAGGTGCACGGCGGCGCGAACGCCGCTCCGTTCCTGACACACATCAACGCGTACAA CCTCGACCTCTATCTCCGCATCGCACCCGAGCTGTACCTGAAGCGCTTGTGCGTCGCAGGAATGGAGAAGGTGTTCGAGA TCGGCCGCGTGTTCCGTAACGAGGGCGTCGACTTCAAACACAATCCCGAATTCACGATCCTCGAGGCCTACGAGGCGCAC AGCGACTACGAGGGCATGATGCGGATGTGCCGCGAGCTCATCCAGGCGGCGGCCGTCGCAGCCTTCGGGCGCGAAATCAT CATGCGACCCGGCCCGGACGGCGAATTGGTCGAGGTCGACATCTCCGGCGAGTGGCCGGTGAAGACGATGCACGGCGCCG TCGCCGAAAAGCTTGGTGTCGACGTCTCCCCCGAGACGAGTCTCGAAGACCTGCAGAAGCTGTGCGACGCCAACGAGATT CCGTACCAGTCCAGCTGGGATACCGGCGCCATCGCGCAGGAGATGTACGAGCACCTGGTCGAGGACTACACGGAGTTCCC GACGTTCTACACCAACTTCCCCACCTCGATGTCTCCGCTCACCCGGCCGCATCGCAGCATCCCCGGCGTCGCCGAGAAGT GGGACCTCGTGGCATGGGGTGTCGAACTCGGAACCGCGTACAGCGAGTTGACCGACCCCGTGGATCAGCGCAACCGGCTC ACCGAGCAGTCGATGCTCGCGGCCGGCGGCGATCCAGAAGCGATGGAATTGGACGAGGACTTCCTTCAAGCCCTCGAACA CGCGATGCCGCCGACGGGTGGTCTCGGGATGGGCGTCGACCGAATCGTCATGCTGATCACGGGCGGCAGCATCCGCGAGA CGCTGGCCTTCCCCCTCGCGAAACCGCGTCAGTAG Protein sequence : MESPPENPRQARRFRKGRFSQVPHISGLILGVFSVLVFLWSISPVLRHILRVPREYIDSYYFDAPDTSLSWALVVALLAA ALASRKRIAWWLLTIYLALITLTNIASTIVDKNPNNAVAAVVLLVVIGILIAARPEFYTRVRRGAGWKALGVLIGGMAVA TVIGWGLVELFPGDLPQNQRFLWALNRVTAAASVDNEVFDGHPRVFVNTVLGLLGAIALLAAVMTLFRAQRSNNALTGND ESAIRGLIQNFGADDSLAYFATRRDKAVIFAPSGKAAITYRVEIGVCLASGDPIGDPEAWPHAIEAWQDLASQYGWATAV MGASETGATAYKKAGLSVLQLGDEAILRTREFNLNGRDMRPVRQAVTRVRRHGVTVRMRRHRDIPPEDMAAVIIRADDWR DTDTERGFSMALGRLGDHLDGDCLLVEAVMGEGTEDESVVGMLSLVPWGPNGVSLDLMRRKPTAPNGVVELMVSELATRS DEIGVVRVSLNFAVFRSVFEEGSRIGAGPILRIWRSVLVFFSRWWQLEALYRSNVKYQPDWEPRFLCFEDNRELPRVGFA SAIAEGFVVLPSFGRKSSQVVKHTGTHAAVPAALVTSEGLHADGSPPDSAPSFTTNGPRRPEQVRVRMNKLAQLADEGIA AYPVAYPPTHTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLAEFAAEFDLGDLIEV SGTIGRSRKGELSLIAVEWRMNGKCLHPLPDKWKGLSDPETRVRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYL EVETPILQQVHGGANAAPFLTHINAYNLDLYLRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFKHNPEFTILEAYEAH SDYEGMMRMCRELIQAAAVAAFGREIIMRPGPDGELVEVDISGEWPVKTMHGAVAEKLGVDVSPETSLEDLQKLCDANEI PYQSSWDTGAIAQEMYEHLVEDYTEFPTFYTNFPTSMSPLTRPHRSIPGVAEKWDLVAWGVELGTAYSELTDPVDQRNRL TEQSMLAAGGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITGGSIRETLAFPLAKPRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-162 | 42 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-162 | 42 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-162 | 42 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-162 | 42 |
