Gene Information

Name : RER_07290 (RER_07290)
Accession : YP_002764176.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 810844 - 811536 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAACGCACAAGCACCCGCAGTCCTGTCGGTCCACGCGCTGGGCAAGTCGTACGGCGACGTTCCGGTGCTCCGAGG
TGTATCGCTGGAAGTGCGCGCCGGTACTGCCACGGCCATCATGGGTCCTTCAGGATCGGGGAAGTCGACACTGCTGCATT
GCATGTCAGGAATCGTCAAGCCCGACTCGGGAGCAATCTTGCTGAGCGGCCGGCATATCGAGAACCTCGGTGAGAACGAC
CGCAGCCGGCTCCGACGGGAGTCGTACGGGTTCGTTTTTCAATCGGGCCAACTGTTGCCGGAGCTTCCGGCGATCGAGAA
CGTCGCTTTGCCCTTGGTGCTCAACGGGTTGTCCATCGCAGAAGCCAAGCGGACGGCGCACGGCTTCTTCGCGCCGTTGG
GGCTGGATGGGTTGCAGGATCGTCGCCCGGGTCAGATGTCGGGTGGGCAGTCGCAACGTGTCGCGATTGCGCGAGCGTTG
GTGACCAAACCCGCCGTTCTCTTCGCGGACGAGCCGACCGGTGCCCTCGACGCGCAGACGAGTTGGGAAGTGATGAGGGT
GTTGCGTGATTCGGCTCAACAGATCGGTTCTGCGTTGGTCGTCGTCACTCACGATGCCGAAGTCGCTCGGTGGTGTGATC
GCACGATGATGATGCAGGCCGGTTCGCTTGTCGGGACACAGGTGGCGGCATGA

Protein sequence : 
MNNAQAPAVLSVHALGKSYGDVPVLRGVSLEVRAGTATAIMGPSGSGKSTLLHCMSGIVKPDSGAILLSGRHIENLGEND
RSRLRRESYGFVFQSGQLLPELPAIENVALPLVLNGLSIAEAKRTAHGFFAPLGLDGLQDRRPGQMSGGQSQRVAIARAL
VTKPAVLFADEPTGALDAQTSWEVMRVLRDSAQQIGSALVVVTHDAEVARWCDRTMMMQAGSLVGTQVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_07290 YP_002764176.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 46
RER_07290 YP_002764176.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_07290 YP_002764176.1 putative ABC transporter ATP-binding protein VFG2059 Protein 9e-20 41