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Name : gabD (RER_05830) Accession : YP_002764030.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 658908 - 660353 bp Length : 1446 bp Strand : + Note : - DNA sequence : ATGTCCAACGTCTCGGATCTTCTCGACTCGGTACCCAAGGGTCTCTGGCTCGGCGGCAAGCTCGTCCCGGCCGAGAAGAC CTTTGCGGTCTACAACCCGGCAACGGGTGAGGAACTCGCCCAGGTAGCCGACGCCACCGCTGCCGACGGTATCCGTGCGC TCGACCTCGCCGCTGCGGCGCAGGAAGACTGGGCGGCCACGCCGGCACGTGTACGCGGCGAGATCCTGCGCACCGCCTTC GAATTGCTGCACGCCCGCGCCGAGGACTTCGCGCTGATGATGACCCTGGAAATGGGTAAGTCGTTGGCAGAGAGCCGCGG TGAGGTCAACTACGGCGGCGAATTCCTGCGCTGGTTCAGCGAGGAAGCAGTACGCATCGGCGGACGTTTCACGCAGGCTC CGGCCGGCAACGGTCGCATCCTGGTCACCAAGGAAGCCGTCGGACCGGTCCTTGCGATCACCCCGTGGAACTTCCCGCTC GCCATGGGCACACGCAAGATCGGACCGGCGCTGGCTGCCGGTTGCACCATCATCGTCAAGCCCGCCGAGGACACGCCGCT GACCATGCAGCTCCTCGGTCAGGTGTTCGCCGATGCCGGTCTGCCCGACGGTGTGCTCTCGATCCTCCCGACGTCCGACG CGGCCTCCATCAGTGGACCGCTGATGGAAGATGCGCGTCTGCGCAAGGTCACCTTCACCGGCTCCACGGGCGTCGGAAAG CTGTTGGTGCGGGGTGCCGCTGACAAGCTGCTCCGCACGTCGATGGAACTCGGTGGCAATGCGCCGTTCATCGTCTTCGA CGACGCCGACATCGACGCAGCTGTCGACGGCGCAATGCTCGCGAAGATGCGTAACGGCGGCGAGGCCTGCACCGCGGCCA ACCGCATCTACGTCGCCAACTCGGTGCGCGAGGAGTTCACCGACAAGTTCACCGCCAAGGTTGCGGCCTTGAAGGTGGGC GCCGGTGACGCCGAGGGCACCAACATCGGCCCGCTGATCAACACCAAGCAGCTCGCAACCGTCACCGGACTCGTCGACGA CGCCGTGTCCAAGGGCGCTCGCGTTCGCACCGGTGGATCGGCGCCCGAAGGAGCCGGCTTCTTCTTCACCCCGACCGTTC TGGATCAGGTGCCCGCCGATGCGCGCCTGCTGAAGGAAGAGATCTTCGGACCCGTTGCGGCAGTGGTCGGTTTCGACACC GAAGACGAAGCGATCGCGGCTGCGAACAACACCGAGTACGGCCTCGTGGCGTACTTCTACACCCGCGACATCGACCGGGC GATGCGCGTCTCGGCCAAGCTGGACACCGGCATGGTCGGCGTCAATCGCGGCGCGATCTCCGATGCTGCGGCGCCGTTCG GTGGCGTGAAGGAATCGGGCTTCGGCCGTGAAGGCGGTACCGAGGGTATCGACGAGTATCTCGATACCAAGTACGTAGCG CTCTAA Protein sequence : MSNVSDLLDSVPKGLWLGGKLVPAEKTFAVYNPATGEELAQVADATAADGIRALDLAAAAQEDWAATPARVRGEILRTAF ELLHARAEDFALMMTLEMGKSLAESRGEVNYGGEFLRWFSEEAVRIGGRFTQAPAGNGRILVTKEAVGPVLAITPWNFPL AMGTRKIGPALAAGCTIIVKPAEDTPLTMQLLGQVFADAGLPDGVLSILPTSDAASISGPLMEDARLRKVTFTGSTGVGK LLVRGAADKLLRTSMELGGNAPFIVFDDADIDAAVDGAMLAKMRNGGEACTAANRIYVANSVREEFTDKFTAKVAALKVG AGDAEGTNIGPLINTKQLATVTGLVDDAVSKGARVRTGGSAPEGAGFFFTPTVLDQVPADARLLKEEIFGPVAAVVGFDT EDEAIAAANNTEYGLVAYFYTRDIDRAMRVSAKLDTGMVGVNRGAISDAAAPFGGVKESGFGREGGTEGIDEYLDTKYVA L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-91 | 47 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-94 | 47 |
