Gene Information

Name : mntB (RER_59750)
Accession : YP_002769422.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : putative manganese ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 6456198 - 6457076 bp
Length : 879 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCTCGTTGAACTGCTACTTGATCCTCTCCAGTACGGATTCATGGTGCGCGCGTTGGCCGTTGCGGTTGTGGCGGC
GGTTGTCTGCGCGGTGCTCAGTTGTTGGTTGGTGCTCATCGGGTGGTCACTGATGGGCGATGCCGTCTCGCACGCTGTCC
TGCCCGGTGTTGTCCTCGCCTACGTCGTCGGCGCTCCATTTGCCATCGGGGCCTTGATCTTCGGGCTGATCGCCGTCGCA
CTGATCGGACTGATCCGTAACACCAGCCGCGTCAAGGAAGACGCCGCGATCGGTATCGTCTTCACGACTCTCTTTGCGTT
CGGTTTGGTTCTCATCTCGGTGACCCCCAGCCAGACCGATCTCAACCACATCATTTTCGGCAACCTGCTGGGGGTGAGCT
CGTCCGATCTTCTGCAGGTCGCGATACTCGGCGCGTTGGCGTTGAGCATTCTGTTGATCAAGCGTCGCGATCTGACGTTG
TTTGCCTTCGACCCGATCCATGCCAACGCGATAGGTCTTTCGCCCAAGCGTCTCGGAGCGCTGCTACTCGGCGTCCTCGC
ACTCACGTCCGTTGTGGCGCTGCAAGCTGTCGGAGTCGTGCTGGTGGTGGCGATGCTGATCATCCCCGGCGCGACGGCCT
ACCTTCTCACTGACAAGTTCTCGCGGATGCTGGTGATAGCTCCGGTGGTTTCCGCAATCTGCGCGATTACGGGTATCTAC
GTCAGCTACTACCTCGACACAGCTTCCGGGGGCATGGTTGTGATGACGCAGGGCATCGTATTCGCCCTGGTGTACCTGTT
CAGCCCGTCGCAGGGGGTCATCGCGAAATGGACTTCGCAGCGGCGTAGGACCCGAGCGGAATACAGCGCCGTGGCTTGA

Protein sequence : 
MNLVELLLDPLQYGFMVRALAVAVVAAVVCAVLSCWLVLIGWSLMGDAVSHAVLPGVVLAYVVGAPFAIGALIFGLIAVA
LIGLIRNTSRVKEDAAIGIVFTTLFAFGLVLISVTPSQTDLNHIIFGNLLGVSSSDLLQVAILGALALSILLIKRRDLTL
FAFDPIHANAIGLSPKRLGALLLGVLALTSVVALQAVGVVLVVAMLIIPGATAYLLTDKFSRMLVIAPVVSAICAITGIY
VSYYLDTASGGMVVMTQGIVFALVYLFSPSQGVIAKWTSQRRRTRAEYSAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 9e-36 46
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-35 46
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-36 46
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-36 46
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-36 46
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-34 43
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-34 43
sitC NP_461784.1 permease Virulence SPI-1 Protein 3e-34 43
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-34 43
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-34 43
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 6e-27 41
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_002769422.1 putative manganese ABC transporter permease protein BAC0441 Protein 1e-38 47
mntB YP_002769422.1 putative manganese ABC transporter permease protein BAC0442 Protein 8e-34 47
mntB YP_002769422.1 putative manganese ABC transporter permease protein BAC0352 Protein 5e-36 46
mntB YP_002769422.1 putative manganese ABC transporter permease protein BAC0351 Protein 1e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_002769422.1 putative manganese ABC transporter permease protein VFG0528 Protein 5e-36 46
mntB YP_002769422.1 putative manganese ABC transporter permease protein VFG0527 Protein 1e-34 43