Gene Information

Name : RER_57350 (RER_57350)
Accession : YP_002769182.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 6203960 - 6205015 bp
Length : 1056 bp
Strand : -
Note : -

DNA sequence :
GTGAACATGATTGCCGCGCAGCCGGTCCCACCGCTCTTGCGCGGTTGGGTGGTTCGAATCGGGTCGTGGTCGTGGCGAAT
AGTCCCGCGAGTGCTGTTCGTTGCCATATCAATCAGCGCGGCATTGGCGGCGCTCTCGTTTGCCACGCTGATGTACGGAA
CCTTGGACCTGTCCTTGGGCGAGGTGTGGCGCGCTCTGAACGGCGAAGGCACCCCAGCGGCGGTTCGGTCCGTCCAGAAT
CGCCGTCTTCCACGGCTGATCACCGCGATCGGGGTGGGTGGAAGCCTCGGTGTGGCCGGCGCGGTTTTCCAGACGCTTTC
GCGCAATGTTCTCGGCTCGCCGGACATCATTGGTTTCACCACCGGCGCTGCGACGGCGGCGGTGGTACAGATCGTGTTCT
TCGGCGGCGGGGTACTCCAGACCGCGGGCGCTGCTGTTCTCGGCGGCATGCTGACCGCATTGCTCGTGTACGCGCTGGCA
CGCAAAGACGGAGTCAGCGGCGGTCTTCGACTCGTCCTGGTCGGCATCGGAGTTGGGGCGATGCTGAGCGCCGTGATGTC
GTTCCTGGTGGTACGCGCGGATATCGACGACGCCACCGTGGTGCAGCAGTGGACGGCCGGTTCGCTGACCGGGCGCGGTT
GGCCACACGCGATCAGCGTTGCGATCGCCGTCGGTGTTCTCGTTCCTGCTCTCGTCGTGGTGTCCAGGCGCGTCACCATG
ATGGAAATGGGCGACGACGCAGCGTCTTCGCTCGGAATCTCCGTGGAGCGATACCGATTCGCCGGCATCCTGCTTGCGGT
CGCGCTCACCGGAGCAGCAACTGCAGCTACCGGTCCCATCGCCTTTGTGGCGCTCGCAGCTCCCCAGATCGCACGACGGT
TGGCTCGGCGCAGCGGTGTTCTTGTCGCGACCTCCTTCCTGCTCGGCGCGGTTCTGTTGGCGGGCGCCGACTTGATTGCC
CAAGCGGTCGAGGTCGGTCTCCGAACTCCGGTCGGTCTTGTCACCAGTCTGCTCGGCGGTGCCTATCTGATCTGGCTGCT
GGCCCGTCAGGCCTGA

Protein sequence :
MNMIAAQPVPPLLRGWVVRIGSWSWRIVPRVLFVAISISAALAALSFATLMYGTLDLSLGEVWRALNGEGTPAAVRSVQN
RRLPRLITAIGVGGSLGVAGAVFQTLSRNVLGSPDIIGFTTGAATAAVVQIVFFGGGVLQTAGAAVLGGMLTALLVYALA
RKDGVSGGLRLVLVGIGVGAMLSAVMSFLVVRADIDDATVVQQWTAGSLTGRGWPHAISVAIAVGVLVPALVVVSRRVTM
MEMGDDAASSLGISVERYRFAGILLAVALTGAATAATGPIAFVALAAPQIARRLARRSGVLVATSFLLGAVLLAGADLIA
QAVEVGLRTPVGLVTSLLGGAYLIWLLARQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 6e-11 41
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 3e-11 41
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 3e-11 41
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 3e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_57350 YP_002769182.1 putative iron-siderophore ABC transporter permease protein VFG0928 Protein 1e-16 44