Gene Information

Name : RER_52710 (RER_52710)
Accession : YP_002768718.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 5733203 - 5733955 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGGGTAAACGAGTACTGATCGCCGGCGAGAGCTGGATGACGACGTCGACGCACGTCAAGGGCGTCGACGAGTTCAGTGT
CCATTCCTACGTCGAGGGAGTCGGTCCGCTTCGGGATGCGCTCACCTCACGTGGCCACGACGTGACACACATGCCCGCAC
ACCTGGTGCCGACGCAGTTCCCCGGTACCGCAGAAGCGTTGTCCCAGTTCGACGTCGTCGTTCTCTCCGACATCGGAGCG
AACTCGCTGCAGTTGGCTCCCGGTGTCTTCGACCAGTTCCGCGCCGGGGAGGATCGCCTTGTCGCGCTTCGTGACTGGGT
GAACGCCGGCGGCTCACTGATGATGATCGGTGGCTACCTCTCGTTCTCCGGGTTCCAGGCGCGAGCAGCTTTCCGCCAGA
CCGCGATCGCCGAGGTACTACCCGTGACGATGCTGGCCGAAGACGATCGCGTCGAGACACCGGCCGGGATCGTTCCCACC
GTCGTCGATGCTGCTCACCCGGCTCTCGGTGGTGCCGGCGATTCCTGGCCGGCGCTCCTGGGATACAACCGCGTCGTCGC
GAAGGACGGTGCCGTGGTTCCTGCCACCATCAACGGCGATCCGCTTGTCGCTGCCGGTGAATACGGCGCCGGACGGTCGA
TCGTCTTCACCTCGGACTGCTCGCCGCACTGGGCTCCGCCGGAGTTCTGTGAGCAGTGGCCTGGATACACCGACCTGTTC
GACGGCTTGATCAGTTGGGTCGCCGGCGAATGA

Protein sequence : 
MGKRVLIAGESWMTTSTHVKGVDEFSVHSYVEGVGPLRDALTSRGHDVTHMPAHLVPTQFPGTAEALSQFDVVVLSDIGA
NSLQLAPGVFDQFRAGEDRLVALRDWVNAGGSLMMIGGYLSFSGFQARAAFRQTAIAEVLPVTMLAEDDRVETPAGIVPT
VVDAAHPALGGAGDSWPALLGYNRVVAKDGAVVPATINGDPLVAAGEYGAGRSIVFTSDCSPHWAPPEFCEQWPGYTDLF
DGLISWVAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 8e-48 46
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 8e-48 46
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 6e-48 46
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 9e-48 46
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 9e-48 46
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-49 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_52710 YP_002768718.1 hypothetical protein VFG0482 Protein 4e-48 46