Gene Information

Name : RER_51400 (RER_51400)
Accession : YP_002768587.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5606318 - 5607004 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGACCACAGTCGAAAAAACCACTACCGGACTGGTATTGACCGCTGTCAGTCTTCGATTCGGTGACGGTGACTCCACAGT
GCTCGCCCTCGACAACGTGGACCTCAAGGTCGCGGGCGGCGAACTCGTCGCGATCGTCGGGCCGTCAGGGGCTGGAAAGT
CGAGCTTGCTCGCTGTGGCCGGCGGACTCGGTCGGCCGTCGAGTGGAACGATTGTCATCGACGGCGTCGACGTGTCGGCG
ATGCCGGCCCGTGCATTGGCCAAACTTCGACGAGACAAGGTCGGCTTCGTCTTTCAATCCGGCAATCTGATTCCAGCGCT
GACGGCGCGCGATCAGCTTCGGCTGATTCCCAAGCTCACGGGGCGGCCGGGGCGCGATCCCGAGGAATTGCTCGACTCGG
TCGGTATGAGCCACCGTGCGGATCGTCGACCTGGTCAACTCTCCGGCGGCGAACGACAGCGCGTCGGTATCGCTCGGGCA
TTGATGAGCAATCCCTCGCTACTGCTCGTCGACGAGCCGACGGCTGCTCTCGACCGCAAGCGTAGCCATGAGGTGGTTGA
ACTGCTCTCGCGCGAAACTCACGAGGCCGGCGTCGCTACGATCATGGTGACCCACGATCACGACGTGCTCGGGCACTGCG
ACCGCATCCTCGAAATGGTTGACGGTCGATTGCGTCAGAGCGAGTAA

Protein sequence : 
MTTVEKTTTGLVLTAVSLRFGDGDSTVLALDNVDLKVAGGELVAIVGPSGAGKSSLLAVAGGLGRPSSGTIVIDGVDVSA
MPARALAKLRRDKVGFVFQSGNLIPALTARDQLRLIPKLTGRPGRDPEELLDSVGMSHRADRRPGQLSGGERQRVGIARA
LMSNPSLLLVDEPTAALDRKRSHEVVELLSRETHEAGVATIMVTHDHDVLGHCDRILEMVDGRLRQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_51400 YP_002768587.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-35 45
RER_51400 YP_002768587.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-38 42
RER_51400 YP_002768587.1 putative ABC transporter ATP-binding protein BAC0600 Protein 8e-22 41