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Name : clpC (RER_47220) Accession : YP_002768169.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Virulence Product : putative ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5165741 - 5168164 bp Length : 2424 bp Strand : - Note : - DNA sequence : ATGCCAGCATTCTTCGGGCCCGAGGGTCCCGGTCGCATCGATATTTCCCGGCTCATGAGCAGGGCCACCCAGCAACTCAT GGCTGACGCTGCACGTGTAGCGGCTGCTCGCGGTGATTCGGATCTCGATGCACTGCACGTTCTCCGCGTCATGGCGGAGC AGGATCCGGTCCGCACGCTCATGCAGCGCGCCGGAGCCGACCCGAAATCCGTGGTCGACGCCGTCGACCTGCGGCTGCCA CAAGGCCGTGAGCAGGGGGCCTACTCTGCTCCTGCGCTCAGCAGCGCCGTGAAAACCGCTCTACTCGAGGCTCATCAACT GGCCCGAGCCCTGGGATCGACGTACATCGATCCCGAACACCTCTTCATCGCATTGGCTGGTGACCCCGATCATGTTCCGG GTCGTCTGCTCGCTTCGGCCGGCATCACGCCGGAGAAGCTGCAGGCAGCGGTTCAGAATCCTGCAGCCGGTCCAGTCGAA GAGGAGTCCACCACACCGACGCTCGACAAGTACGGCGTCGATCTCACCGATCGCGCACGCAACGGCGGCGTCGATCCGGT GATCGGCCGCGCCGACGAGATCGAACAGACCATCGAGATCCTCTCCCGCCGCACCAAGAACAACCCCGTCCTGGTGGGTG AGGCCGGCGTCGGCAAGACTGCCATCGTCGAAGGTCTCGCCCAGCGCATCGTCGACGGGGATGTCCCGGAATCGTTGATG GGCAAGAGGATAGTCCAGCTCGAACTCTCGAGCATGGTCTCGGGTACTCGCTACCGCGGAGACTTCGAGGAACGGCTGAC CAAGGTGATCGACGAGATCACCGCACACAAGGACGAGCTGATCGTCTTCATCGACGAGATGCACACCATCGCCGGTGCCG GAGGCGGCGCCGAAGGTGCGATGGATGCCGGAAACATCCTCAAGCCCAAGCTCGCTCGCGGTGAACTGCACATCGTCGGC GCCACCACGCTCGACGAATACCGCAAGAACATCGAGAAGGATCCCGCGCTCGAGCGGCGCTTCCAGCCCGTACAGGTCGG AGAGCCGTCGATCGAGGACGCGATCGCCATCTTGAGCGGACTGCGCAGTCGGTACGAGGATCACCACAAGGTCCACTACA CCGACGAGGCGATCACCGCTGCGGTGGAGCTGTCGGCACGTTACATCGGCGACAGGTTCTTGCCGGACAAGGCAATCGAC TTGATCGACCAGGCCGGCGCCAGGCTTCGTTTGAAGACTGCCACGGTAGACACCGCTGCTCTGCAGCAACGTCTCGAGCA GCTCGAGAGCGACAAGGAGAAAGCCGTCGCCGACGAATTGTACGAGAAGGCGTCGACCCTGCGTGACGAGATCAACGGCG TCGCAAAGCGTCTCGAGAAGGCAGGGTCCTCGGTTCCTTCCGAGGAAACTCCGGATGTGACTGCTGAACAGATCGCCGAA GTTGTCGCCCGTGCCACGGGTATTCCGGCCAGTCAGATGACTCAAGCAGAGAAAGATCGCCTGCGCCGTCTGGAAGAGGA ACTGCACGGTCGTGTCATCGGGCAAGATGACGCCGTTCGCGCAATCGCGCGTGCGGTGCGTCGTAGCCGGACCGGTATGA GCGATCCGGATCGTCCCGTCGGTAGCTTCCTGTTCCTCGGACCTACCGGTGTCGGCAAGACGGAGCTCGCAAAAGCTCTG GCTGCCACACTCTTCGGTGACGAGAACAAGATGCTGCGCTTCGACATGAGTGAGTTCGGTGAGAGGCATACGGTAAGCCG ATTGGTCGGTGCTCCTCCCGGATATGTCGGCTACGGCGAGGCCGGACAGCTCACGGAACAGGTGCGTCGTAACCCGTACT CGGTGATCCTGCTCGACGAGATCGAAAAGGCACACCCGGACGTGTTCAACACCTTGCTCCAGGTGCTCGACGACGGGCGT CTGACCGACGGCCAGGGTCGAACGGTGGACTTCAAGAACACCGTCGTGATCATGACCAGCAACCTCGGCTCGGACATCAT CTCGAGCAAGTCCGGTGGACTCGGCTTCACCACAGGCGATGCAGAGTCGGCGGAGAAGCCACTGCGCGACCGCGTGATGG CCAGGTTGCGCGAATCGATGCGGCCGGAGTTCCTCAACCGTATCGACGAGATCGTGATCTTCCGCAAGCTCGACACCGAG CAACTGCACCGGATCACTGATCTGTTGCTCGACGACAGCCGGAAGCGGTTGCAGTCCAAGGGCATCGACATCGAGTTCAC CGCCGACGCAGTGGACTGGATTGCCGAGCACGGGCATCAACCCGAGTTCGGGGCTCGCCCGTTGCGACGTTCGATTCAGC GTGTGGTCGACGACAAGATCGCCGACATGCTGCTCGACGATCTCCTCGAAGAGGGCGGCAGTATCACCGTCGCGGTTGAC GAGGGTGAGTTGGTGTTCAGCTAG Protein sequence : MPAFFGPEGPGRIDISRLMSRATQQLMADAARVAAARGDSDLDALHVLRVMAEQDPVRTLMQRAGADPKSVVDAVDLRLP QGREQGAYSAPALSSAVKTALLEAHQLARALGSTYIDPEHLFIALAGDPDHVPGRLLASAGITPEKLQAAVQNPAAGPVE EESTTPTLDKYGVDLTDRARNGGVDPVIGRADEIEQTIEILSRRTKNNPVLVGEAGVGKTAIVEGLAQRIVDGDVPESLM GKRIVQLELSSMVSGTRYRGDFEERLTKVIDEITAHKDELIVFIDEMHTIAGAGGGAEGAMDAGNILKPKLARGELHIVG ATTLDEYRKNIEKDPALERRFQPVQVGEPSIEDAIAILSGLRSRYEDHHKVHYTDEAITAAVELSARYIGDRFLPDKAID LIDQAGARLRLKTATVDTAALQQRLEQLESDKEKAVADELYEKASTLRDEINGVAKRLEKAGSSVPSEETPDVTAEQIAE VVARATGIPASQMTQAEKDRLRRLEEELHGRVIGQDDAVRAIARAVRRSRTGMSDPDRPVGSFLFLGPTGVGKTELAKAL AATLFGDENKMLRFDMSEFGERHTVSRLVGAPPGYVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGR LTDGQGRTVDFKNTVVIMTSNLGSDIISSKSGGLGFTTGDAESAEKPLRDRVMARLRESMRPEFLNRIDEIVIFRKLDTE QLHRITDLLLDDSRKRLQSKGIDIEFTADAVDWIAEHGHQPEFGARPLRRSIQRVVDDKIADMLLDDLLEEGGSITVAVD EGELVFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-153 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_002768169.1 | putative ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 2e-170 | 53 |
| clpC | YP_002768169.1 | putative ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 5e-148 | 51 |
