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Name : gabD (RER_44340) Accession : YP_002767881.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 4866209 - 4867672 bp Length : 1464 bp Strand : - Note : - DNA sequence : ATGGAACCCATGGACACATTCGAATTCATTCGATCAGTTCCCACCCAGTTGTTCGTCGGCGGCCGGTTCGAGCCCGCGGA GAACAACGCGACCTTCCCGGTGGCGGATCCGGCGACCGGAAAATCGTTGACCGACGTCGCCGATGCGAGCCCCGCGGACG CGCTGCGCGCTCTCGACGAAGCCGTGGCCGTCTCGTCGAAGTGGGCGAGCACACCTGCGCGCGAGCGTGGTGAAATTCTG CGAGCCGTCTTCGAGAAGATCACCGAGCGCGCCGAGGACGTGGCGCTGCTGATGACCCTCGAAATGGGCAAGGCACTCGC CGAGAGCCGTGCCGAGGTCAAATACGGCGCCGAGTTCTTCCGGTGGTTCAGCGAGGAGGCCGTTCGCATCGGCGGGCGCT ACACGCCGGCGCCGGCGGGCAACGGCCGGATCCTTGTCACCAAGGCGCCGGTCGGACCGTGTCTGGCCATCACTCCCTGG AATTTTCCGTTGGCGATGGGCACCCGCAAGATCGGACCGGCGTTGGCCGCCGGCTGCACGATCATCGTCAAGCCCGCCTC GGAGACCCCGTTGACGATGCTGCTGCTCGCTCAGCTCATGGCCGAAGCAGGGCTGCCCGACGGAGTCCTCTCGGTGTTGC CGACATCGAAATCCGGTGAAGTGACCGGCCCTCTCATCGACGACCCTCGACTGCGCAAGCTCACCTTCACCGGGTCCACC GGCGTCGGCAAGATGCTGGTGGAGAAGTCCGCGAAGCGATTGCTCCGCACGTCGATGGAATTGGGTGGCAATGCGCCCTT CGTCGTGTTCGACGACGCGGACGTCGACAAGGCAGTCGAGGGTGCGGTACTGGCCAAGCTTCGCAACGGAGGCGAAGCCT GCACCGCCGCCAACCGGTTCCATGTCGCCAACGCCGTGCGTGAGGAGTTCACGACCAAGCTGACCGAGAAGATGGCGGCG TTCACGATGGGACCGGGTACCGACCCGGAGACGAAGCTCGGCCCGCTGATCAACCAGAACCAGCTCGACACGGTCGCAGA GTTGGTTGCAGATGCGGTGGATGCCGGGGCGAAGGTTCGACTGGGCGGTAAAGCGCCAGGTGGTGAGGGTTACTTCTATC CGGCCACGGTGTTGGCCGACGTTCCGGCGAGCGCGCGGATACTGAAGGAAGAGGTGTTCGGACCCGTTGCCGCGATCACC GGCTTCGACACCGAAGCCGAAGGCATCGCGGCCGCCAACGACACCGAGTTCGGATTGGCTGCGTACATCTTCACGAGGGA TCTCGACCGTGCGCTTCGGGTCTCCGACGCACTGGAATCAGGAATGATCGGCGTCAACCGAGGAGTGATCTCGGACGCGG CAGCGCCGTTCGGCGGTGTGAAGGAATCCGGATTCGGCCGCGAGGGCGGGACCGAGGGGATCGAGGAATACCTGAACACG AAGTACATCGCGCTCGAGAACTGA Protein sequence : MEPMDTFEFIRSVPTQLFVGGRFEPAENNATFPVADPATGKSLTDVADASPADALRALDEAVAVSSKWASTPARERGEIL RAVFEKITERAEDVALLMTLEMGKALAESRAEVKYGAEFFRWFSEEAVRIGGRYTPAPAGNGRILVTKAPVGPCLAITPW NFPLAMGTRKIGPALAAGCTIIVKPASETPLTMLLLAQLMAEAGLPDGVLSVLPTSKSGEVTGPLIDDPRLRKLTFTGST GVGKMLVEKSAKRLLRTSMELGGNAPFVVFDDADVDKAVEGAVLAKLRNGGEACTAANRFHVANAVREEFTTKLTEKMAA FTMGPGTDPETKLGPLINQNQLDTVAELVADAVDAGAKVRLGGKAPGGEGYFYPATVLADVPASARILKEEVFGPVAAIT GFDTEAEGIAAANDTEFGLAAYIFTRDLDRALRVSDALESGMIGVNRGVISDAAAPFGGVKESGFGREGGTEGIEEYLNT KYIALEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-98 | 48 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-109 | 48 |
