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Name : RER_43350 (RER_43350) Accession : YP_002767782.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : putative iron-siderophore ABC transporter permease/ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 4766448 - 4768313 bp Length : 1866 bp Strand : - Note : - DNA sequence : ATGACGACGACACAGGCCACGAAAGCAGACATTTCATCTGAAGAGGCCGACGTATCACAAGGAGCGGCGGCCGAAGCCTC GCAAGCCAAAGCTGAAGCGGCGGAGCACAAGAGCGCGCTTCGCGAACTCCTTGCTCCAGTGCGCACGCGGACCACCATCG CGATGGTGATGCAGGTGATCGCCGCGGTCGCCGCCATCGTGCCGTACGTGGCCATCGCCGAACTGGGTAAGACGCTGATC GTGGGCGGTGACGTCGACTCGTCCCGTGTCTGGACGATCGTGTGGGTGGTCGTCTTCGGTCTGGGTATGCGTGCGTTCTT CGGAGGCGGTGCGTTGATCGTGACGCACTTCGCCGATGTGAATCTGCAGGCGGTGCTGCGGCGTCGAATCACAGCGACTC TCGGTCGACTTCCCCTGGGCTGGTTCACCTCCCACTCGTCCGGAACCGTGCGCAAAGCCGCGCAGAACGACATCTCCGAT CTCCATTACCTGGTTGCGCACAGCGCCGTCGAGACCACCGGAGCCATCGCAGTGCCGCTCGTCGGACTCGGCTACGTGAT CTCGATCGACTGGCGTCTGGGATTGGTCGCGATTGCCACGCTCCCGATCTACATGATCGCCTACGCGATGATGACCAAGG ACATGGCCGTCAAGATGAGCCGGATGAATGAGGGCATCGCGGCAATCAGCAACACCATCGTCGAGTTCGTCACCGGTATC GCAGTGGTCAAGACCTTCGGTCAGGACAAGCAGTCACACTCCCGGTACCGCGACGCCGCCAAGGCATTTGCACTCTCGTA CGAGGGCTGGGTTCGCCCGATGCTCCGGACCGAGGCGCTGGCCTCGATTGCATTGAGCGCACCGGTAGTGCTGGTGGTCA ACCTTGGCCTCGGCTCGTGGTTCGTCCACTCCGGATGGGTGTCACCCATCGATGTGCTGACCAGTTCTCTTGTCGCGATG GTGATTCCGGTGTCGGTGACGACCATCGGTTTCGGTATGCAGGCTCGCCGAGAGGCAGCCGCCGCTGCGGCGCGACTGAT TGCGCTGTTCTCGACCGAGGCGCTGCCGGAAACCGATCATCCGAAAAGTCCCGCGGGGAATGAAGTTCGATTCTCCGGAG TTTCTTTCGCCTACGACGACGGCGCCGACGTTCTGACCGACATCGATCTGACGCTGCCGGAGGGCACGGTGACGGCGTTG GTCGGACCTTCGGGTTCGGGTAAGTCGACGCTGGCAACGCTGGTTCCGAGGTTCCACGACGTGCGTGCCGGATCCGTGGC CATCGGTGGTGCCGACGTCAGGGACGTGGCGACCGACGAGCTGTACCGCCACGTCGGATTCGTTCTGCAGGACGTGCAGC TGGTCGAAGCGACCGTGCTCGACAACATTCGGCTTGCCCGACCGCAGGCGACTTTGGCCGAGGTGAAGGCCGCTGCCGCA GCCGCGCAGATCGACACCCGAATCGAAGCGCTCCCGAGAGGCTACGACTCCGTAGTCGGGGTCGACGCCAGATTCTCGGG TGGTGAAGCCCAAAGAGTCTCCATAGCGCGTGCGATTCTCGCGGACACTCCTGTTCTCGTGCTCGACGAAGCAACCGCTT TCGCCGATCCGGAGTCCGAAGCCGATATCCAGGAGGCGTTGTCGCGCTTGACGGTGGGGCGCACCGTGCTGGTGATCGCG CACCGGTTGGCTTCGATCGTGAGCGCCGATCAGATCGTGGTTCTCGATGCCGGACGGATCGTGGAGAAGGGCACACACGA TCAGCTTGTGGCGAGTGGTTCAACCTATGCCCGGATGTGGGCGAGTCACAGTCGGGCCGACAGCATCGCTGGTACGTCTG ACGCAGCAGGAAAGGCCAACTCATGA Protein sequence : MTTTQATKADISSEEADVSQGAAAEASQAKAEAAEHKSALRELLAPVRTRTTIAMVMQVIAAVAAIVPYVAIAELGKTLI VGGDVDSSRVWTIVWVVVFGLGMRAFFGGGALIVTHFADVNLQAVLRRRITATLGRLPLGWFTSHSSGTVRKAAQNDISD LHYLVAHSAVETTGAIAVPLVGLGYVISIDWRLGLVAIATLPIYMIAYAMMTKDMAVKMSRMNEGIAAISNTIVEFVTGI AVVKTFGQDKQSHSRYRDAAKAFALSYEGWVRPMLRTEALASIALSAPVVLVVNLGLGSWFVHSGWVSPIDVLTSSLVAM VIPVSVTTIGFGMQARREAAAAAARLIALFSTEALPETDHPKSPAGNEVRFSGVSFAYDDGADVLTDIDLTLPEGTVTAL VGPSGSGKSTLATLVPRFHDVRAGSVAIGGADVRDVATDELYRHVGFVLQDVQLVEATVLDNIRLARPQATLAEVKAAAA AAQIDTRIEALPRGYDSVVGVDARFSGGEAQRVSIARAILADTPVLVLDEATAFADPESEADIQEALSRLTVGRTVLVIA HRLASIVSADQIVVLDAGRIVEKGTHDQLVASGSTYARMWASHSRADSIAGTSDAAGKANS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 6e-98 | 47 |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 2e-90 | 42 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 2e-90 | 42 |
