Gene Information

Name : RER_40890 (RER_40890)
Accession : YP_002767536.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4496805 - 4497578 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTCGCACGCCCAGGATGTCGCGGCCCGCGCAGTCGGCCTGTCCAAGACCTACGGCACCGGAGATACCCAGGTGCA
CGCACTCAGTTCGGTGTCCGCAGATTTCGCCCGCGGTGAGTTCACGGCGATCATGGGGCCGTCCGGTTCCGGTAAGTCGA
CGCTGATGCATTGCCTCGCCGGTCTGGATTCCGCAAGTTCGGGTTCCGTTCTCATCGGCGACACGGAACTCACGACGCTT
TCCGACAAACAGATGACCCAATTGCGACGCGATCGCATCGGTTTCGTTTTCCAGGCGTTCAACCTGGTGCCGACGCTGAC
GGCGCTCGAGAACATCACGTTGCCGCTCGACATCGCGGGACGCAAAGCGGACCCGACCTGGCTGAACAGCGTCCTGACCA
AGCTGGGTCTCGGGGATCGCCTCGATCACCGGCCGGGAGAGCTCTCGGGTGGTCAGCAGCAGCGTGTGGCGTGTGCGCGT
GCGCTGGCGGGTCAGCCGGAGATCATCTTCGGCGACGAGCCGACCGGAAACCTCGATTCGAAGTCCTCCGGGGAGGTGCT
CTCGATCCTGCGGGCGGCCGTCGACGAGTTCAACCAGACCGTGGTGATCGTGACGCACGATCCGCGGGCAGCGGCGTATG
CCGACCGAGTGGTGTTCCTCGCGGACGGCAAGATCGTCGACGAATTGCGCGAACCTACGGCGGATTCGGTCCTCGACCGG
ATGAAGCGTCTGGACGCTCCGCAGGCGGTCGTGAACGTGGAAGCCGGGGCTTGA

Protein sequence : 
MSSHAQDVAARAVGLSKTYGTGDTQVHALSSVSADFARGEFTAIMGPSGSGKSTLMHCLAGLDSASSGSVLIGDTELTTL
SDKQMTQLRRDRIGFVFQAFNLVPTLTALENITLPLDIAGRKADPTWLNSVLTKLGLGDRLDHRPGELSGGQQQRVACAR
ALAGQPEIIFGDEPTGNLDSKSSGEVLSILRAAVDEFNQTVVIVTHDPRAAAYADRVVFLADGKIVDELREPTADSVLDR
MKRLDAPQAVVNVEAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-38 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-41 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-41 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_40890 YP_002767536.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-51 47
RER_40890 YP_002767536.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-41 47
RER_40890 YP_002767536.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-44 46
RER_40890 YP_002767536.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-42 44
RER_40890 YP_002767536.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-35 43