|
Name : kdpA (RER_37260) Accession : YP_002767173.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 4070573 - 4072258 bp Length : 1686 bp Strand : - Note : - DNA sequence : ATGTCGCCCGCTCTTGCAGCCGGCCTGCAGATCGCTTTTGTCCTCGCCGTTCTGGCAATTGCCTACGTTCCGGTGGGCGA CTACATGGCACGCGTTTACTCGTCGACGCGGGATCTGCGGGTCGAGAGTGTGATCTACCGCGTCGGCCGGATCGACTCGC GGGCCGAGCAGACGTGGTACGGCTACGCCGCAAGCGTTCTCGGATTCTCGTTGGCGAGCGCATTGTTCTTGTACTTTCTC CAACGGATTCAGGGTGTACTACCGCTGAGTGACGGACTGTCCGGCGTCAGCCCTGCCGTTGCCTTCAACACCGCGATTTC CTTTGTGGCGAACACGAACTGGCAGTCGTACACGCCGGAAACGACGATGAGCAACTTCGTTCAGCCCGTCGGCCTGGCGG TGCAGAACTTCGTCTCTGCCGCAGTCGGGATGGCGGTGGCCATCGCATTGGTTCGTGGCTTCATTCGGGTTGCCCGGGGC GGCGAGATCGGCAACTTCTGGGTCGATCTGACGCGTGGTTCTCTGCGCATCCTCCTCCCGTTCTCCTTCGTGATCGCCCT GATCCTGTTGAGCCAGGGAGTGATCCAGTCGTTCCACAGCGGTTTCGCCTCCACCGGCCTCGACGGCAATGCGGTGACCA ATGCACTAGCTCCCGTCGCGTCCCAGGAAGCGATCAAGGAACTCGGCACCAACGGCGGCGGGATCTTGGCTGCCAACTCG GCGCACCCGTTCGAGAACCCCACCCCGCTGAGCAATATCGTCGAGATTCTGGCGATCCTGTTGATTCCGGTCTGCCTCAC ACGAACATTCGGAACTCTCGTCGGTGATCGTAGGCAAGGCCTCACCCTGCTCGCAGTGATGGGAATCCTGTGGAGCGGAC TGCTCGCGGTGACGCTCGCTGCCGAATCCGGCGCACGCGGTGTTGCCGCCACAGCAGCTGGTTCGATGATGGAGGGCAAG GAAGTTCGCTTCGGAATCCCCGGATCGGCATTGTTCGCGGTGGCGACCACGGGAACGTCGACGGGTGCGGTGAACTCGGC CCACGACAGCATGTCGCCCCTCGGCGGCGGCGCGGTCCTACTCAACATGTTGCTCGGCGAAATCGCGCCGGGCGGAGTCG GAACCGGCCTCTACGGGATTCTCGTGCTGGCGCTGATCGCAGTGTTCGTCGGCGGACTGTTGGTCGGTCGCACGCCCGAA TACCTCGGCAAGAAGTTGGGTCGACGCGAGATAACCCTTGCGGCGCTGTCGATCCTGGTCATGCCCGCACTGGTCCTGAT CGGTACCGCCATCACCGTGATCCTTGGTTCGACCACCGGTTATCAAGGTAACGGGGGAGATCCGGGCACGCCGGGATCGA TCCACGGGTTCAGCGAGGTGCTCTACGCTTTCGCTTCCGCCTCGAACAACAACGGCAGCGCGTTCGGCGGTCTGACCGTC ACCAGCGACTGGTTCCAGTCGTCTCTCGGAATCTGCATGCTTCTGGGCCGATTCCTGCCCATCATCTTCGTTCTCGCTCT GGCCGGTGCGCTGGCCTCTCAGAAGAAGGTGGCGCCGACGGCGGGCACCCTCCCCACATCCGGCCCGATGTTCACCGGCC TGTTGACCGGCACCGTCGTTCTTGTTGCTGCACTTACATTCTTCCCGGCCCTCGCGCTGGGCCCGCTAGCGGAGGCTCTT CAATGA Protein sequence : MSPALAAGLQIAFVLAVLAIAYVPVGDYMARVYSSTRDLRVESVIYRVGRIDSRAEQTWYGYAASVLGFSLASALFLYFL QRIQGVLPLSDGLSGVSPAVAFNTAISFVANTNWQSYTPETTMSNFVQPVGLAVQNFVSAAVGMAVAIALVRGFIRVARG GEIGNFWVDLTRGSLRILLPFSFVIALILLSQGVIQSFHSGFASTGLDGNAVTNALAPVASQEAIKELGTNGGGILAANS AHPFENPTPLSNIVEILAILLIPVCLTRTFGTLVGDRRQGLTLLAVMGILWSGLLAVTLAAESGARGVAATAAGSMMEGK EVRFGIPGSALFAVATTGTSTGAVNSAHDSMSPLGGGAVLLNMLLGEIAPGGVGTGLYGILVLALIAVFVGGLLVGRTPE YLGKKLGRREITLAALSILVMPALVLIGTAITVILGSTTGYQGNGGDPGTPGSIHGFSEVLYAFASASNNNGSAFGGLTV TSDWFQSSLGICMLLGRFLPIIFVLALAGALASQKKVAPTAGTLPTSGPMFTGLLTGTVVLVAALTFFPALALGPLAEAL Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 1e-67 | 48 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 9e-68 | 48 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 2e-50 | 41 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 3e-50 | 41 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-50 | 41 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-50 | 41 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-50 | 41 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-50 | 41 |
