Gene Information

Name : glnA (RER_36230)
Accession : YP_002767070.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : glutamine synthetase I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 3968072 - 3969508 bp
Length : 1437 bp
Strand : +
Note : protein synonym:glutamate--ammonia ligase

DNA sequence :
GTGGCGTTCACCACGGCCGAAGAGGTCATCAAGTACATCGCGGACGAGAACATCGAGTACGTCGACATTCGGTTCAGCGA
CCTGCCCGGCGTCCAGCAGCACTTCTCGATCCCGGCGTCTGCTTTCAACCAGGACGTGTTCGAGGACGGCCTCGCATTCG
ACGGATCTTCGGTCCGCGGATTCCAGTCGATCCACGAGTCCGACATGATGTTGCTTCCCGACGTCACCACGGCGCAGATC
GACCCCTTCCGCAAGGCGAAGACCCTCAACATCAACTTCTTCGTGCACGACCCGTTCACCCGTGAGTCCTACAGCCGCGA
CCCGCGCAACGTTGCCCGCAAGGCCGAGGAGTACTTGGTCAGCACCGGCATCGCGGACACCGCATTCTTCGGCGCCGAGG
CCGAGTTCTACATCTTCGACTCGGTTCGCTACGACTCCGGCATGAACTCCGCGTTCTACGAGCTGGATTCCATCTCCGGT
TCCTGGAACACCGGCGCAGAGACCAACGCCGACGGCTCCCCGAACCTCGGCTACAAGGTTCGCGCCAAGGGTGGCTACTT
CCCCGTCGCTCCGTACGACCACTACGTGGACCTGCGCGACGAAATCTCCACCAACCTGACCAACGCGGGCTTCGAGCTCG
AGCGCGGCCACCACGAGGTCGGCACCGGCGGACAGCAGGAGATCAACTACAAGTTCAACACGCTGCTCGCAGCTGCTGAC
GACCTGCAGTTGTTCAAGTACATCGTCAAGAACACCTGCTGGCAGCACGGCAAGTCCGCGACCTTCATGCCGAAGCCGCT
CTTCGGTGACAACGGCTCGGGCATGCACGTCCACCAGTCCCTGTGGAAGGACGGCAAGCCCCTCTTCCACGACGAGTCCG
GCTACGCAGGCCTCTCGGACATGGCTCGCCACTACATCGGCGGCATCCTGCACCACGCTCCGTCGCTGTTGGCCTTCACC
AACCCGACGATCAACTCGTACCACCGTCTGGTGCCGGGCTACGAAGCCCCCATCAACCTCGTGTACAGCCAGCGCAACCG
CTCGGCAGCTGTCCGTATCCCGATCACGGGCAACAACCCGAAGGCAAAGCGTCTCGAGTTCCGCGCACCCGACTCCTCGG
GTAACCCGTACCTCAACTTCGCTGCACAGATGATGGCCGGCCTGGACGGCATCAAGAACAAGATCGAGCCGATGGCTCCG
GTCGACAAGGACCTCTACGAGCTTCCCCCGGAGGAGGCTCGCAACATCCCGCAGGCTCCGACCAGCCTCGAGACGGTCAT
CAACCGCCTCGAAGCCGATCACGAGTACCTGACCGAGGGTGGCGTCTTCACCACCGACCTGATCGAGACCTGGATCTCGC
TCAAGCGCGAGCAGGAAATCGCTCCGGTCAACCTGCGTCCGCACCCGTACGAGTTCGAGCTCTACTACGACGTGTGA

Protein sequence :
MAFTTAEEVIKYIADENIEYVDIRFSDLPGVQQHFSIPASAFNQDVFEDGLAFDGSSVRGFQSIHESDMMLLPDVTTAQI
DPFRKAKTLNINFFVHDPFTRESYSRDPRNVARKAEEYLVSTGIADTAFFGAEAEFYIFDSVRYDSGMNSAFYELDSISG
SWNTGAETNADGSPNLGYKVRAKGGYFPVAPYDHYVDLRDEISTNLTNAGFELERGHHEVGTGGQQEINYKFNTLLAAAD
DLQLFKYIVKNTCWQHGKSATFMPKPLFGDNGSGMHVHQSLWKDGKPLFHDESGYAGLSDMARHYIGGILHHAPSLLAFT
NPTINSYHRLVPGYEAPINLVYSQRNRSAAVRIPITGNNPKAKRLEFRAPDSSGNPYLNFAAQMMAGLDGIKNKIEPMAP
VDKDLYELPPEEARNIPQAPTSLETVINRLEADHEYLTEGGVFTTDLIETWISLKREQEIAPVNLRPHPYEFELYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-92 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_002767070.1 glutamine synthetase I VFG1399 Protein 0.0 80