Gene Information

Name : xerD (RER_32600)
Accession : YP_002766707.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3534367 - 3535290 bp
Length : 924 bp
Strand : -
Note : -

DNA sequence :
GTGCTTGCCCGACAGGTGGACTCGTATCTCGACCATCTAGCGGTCGAGCGAGGATCTGCGCGCAACACTCTGCTTTCGTA
TCGCCGCGACCTGAATCGGTACGCGGAGTACCTGGACGGTCGCGGCATCGACGACGTCGCGGGCGTGACGGAGAACGACG
TCACCGAATTCGTGACACATTTGCGCCTGGGTGACAAAGATGCCGGAGTCCTACCGTTGGCGGCCAGTTCGGCTGCGAGG
ACCCTGATCGCGGTCCGCGGATTCCACAAGTTCTCCGCCGCCGAGGGCCTGGTCGGTGTCGATGTGGCTCGTACGGTCAA
GCCGCCGACGCCCGGACGCAAGCTGCCCAAGGCTCTGCCGCTCGACGACGTGATCGCCCTACTCGACGCTTCGGGTGGCG
GGGCGGCCGGTGACGGGCCCCGCGACCTGAGGGATCGCGCTCTGCTCGAGCTTCTGTACTCGACCGGAGCACGCATCACC
GAGGCGATCGATCTGGACGTCGACGACATCGACACCGAAACCCGTTCCGTGCTGCTCAAGGGCAAGGGCGGCAAGCAGCG
GATCGTCCCCGTCGGCAGGCCGGCGATCGCCGCCGTAGACGCGTATCTCGTCCGCGGGCGCCCCAGCCTCGCGACGCGTG
GTGTTCCTGCCCTCTTTCTCAACGCTCGCGGGGGACGCCTCTCGCGTCAGAGTGCATGGCAGATTCTTCAGGACGCGGCC
GCGTCGGCCGGGATCAAGGCGGACGTCTCACCCCATACGCTCAGGCACTCGTTTGCCACACACCTGCTCGACGGCGGCGC
GGACGTACGCGTCGTGCAGGAACTTCTCGGTCACGCTTCGGTAACCACGACGCAGATCTACACACTGGTCACCGTCACAG
CGCTGCGCGAAGTGTGGGCTCAGGCACACCCACGCGCCCGTTAG

Protein sequence :
MLARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLDGRGIDDVAGVTENDVTEFVTHLRLGDKDAGVLPLAASSAAR
TLIAVRGFHKFSAAEGLVGVDVARTVKPPTPGRKLPKALPLDDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARIT
EAIDLDVDDIDTETRSVLLKGKGGKQRIVPVGRPAIAAVDAYLVRGRPSLATRGVPALFLNARGGRLSRQSAWQILQDAA
ASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTALREVWAQAHPRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-26 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-26 41