Gene Information

Name : RER_03170 (RER_03170)
Accession : YP_002763764.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 358935 - 359978 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence : 
GTGACTGTAACCTCGCAGGATTCGACGTCGGGCGCCAGCGATACGCGGCGCCCGACGTTCGGCAATTCGCTGTGGCTGAT
CGCCCTTCTCGTGGTCCTCGCGGTGCTCATGTGCGCCTCGATCGTCATCGGCTCTCGTGAGGTCGATTGGTCCGACATCG
TTGCCGCACTTGGCGGTTCCACCGACAATATCGGTCAGGGTGCGATTGCCAAGCGCATTCCGCGGACGGTGCTCGCGATC
GTCGTGGGTGCTGCGCTCGGTCTTGCCGGCGCGGTGATGCAGGGGATTACCCGAAACCCTTTGGCGGATACCGGAATCCT
GGGCGTCAACATGGGCGCTTCGCTCGCCGTGGTGATCGGAATGGCGTGGTTCGGATTGTGGACCCAGACCAGCATGATCT
GGGTGGCCGTACTCGGTGCAGCCGGGGCGGCATTGTTCGTCTACGTAGTCGGGTCACTCGGGCGAGGTGGAGCCACGCCA
CTCAAGTTGGCTCTTGCCGGGGCCGCAACATCGGCTGCGTTTGCTTCGTTCATCACTGCGATCATGCTGCCGCGAAACGA
TATTGCGGGCAACATTCGTTCGTGGCAGATCGGCGGCGTCGGTGGCGCGAGTTTCGAGGTGATCCGGCAGGGTCTGCCTT
TCCTCATTGTCGGCTTCGTGATCTGTCTGCTGTCAGCGCGCAGTCTCAACTCTCTTGCGCTCGGCGACGAGGTTGCGTCA
GGTCTCGGCGAACGCGTCGCGGTGGTTCGTGCAGTGGCAGCGCTCGGTGCAGTGTTGCTCTGCGGTGCGGCCACTGCCAT
TGCCGGACCGATCGGCTTCGTCGGTTTGGTTGTCCCGCATCTGTGCCGGTTGCTGATCGGGATCGACAACCGTTGGCTAC
TACCGTTTTCTGCGCTGACAGGTGCCGGCCTTCTCGTCGCCGCCGACATTCTCGGACGAATTGTCGCCCGGCCGAGCGAA
ATCGACGTCGGCATCATCACCGCGCTCGTCGGAGCGCCCTTCTTCATTTACATAGTCCGCCGTCAGAAAATACGTGAGCT
GTGA

Protein sequence : 
MTVTSQDSTSGASDTRRPTFGNSLWLIALLVVLAVLMCASIVIGSREVDWSDIVAALGGSTDNIGQGAIAKRIPRTVLAI
VVGAALGLAGAVMQGITRNPLADTGILGVNMGASLAVVIGMAWFGLWTQTSMIWVAVLGAAGAALFVYVVGSLGRGGATP
LKLALAGAATSAAFASFITAIMLPRNDIAGNIRSWQIGGVGGASFEVIRQGLPFLIVGFVICLLSARSLNSLALGDEVAS
GLGERVAVVRAVAALGAVLLCGAATAIAGPIGFVGLVVPHLCRLLIGIDNRWLLPFSALTGAGLLVAADILGRIVARPSE
IDVGIITALVGAPFFIYIVRRQKIREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 5e-32 46
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 5e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_03170 YP_002763764.1 putative iron-siderophore ABC transporter permease protein VFG0926 Protein 3e-16 42