Gene Information

Name : RER_31070 (RER_31070)
Accession : YP_002766554.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 3344959 - 3346050 bp
Length : 1092 bp
Strand : -
Note : -

DNA sequence :
GTGACGCTCAAGCAGGAACTCCGGGTACTCCCCCGGACCGTCCCCTCACGTAAGTCGATCCGCCTCGGTGGATTCTCGCT
CGTCTACCGCCCACTCGCGGTGTCGGTGAGCATTGCCCTCGCAGTTGCGCTGTTCCTTCTGCTTTGCATCAACATCGGGC
GGGGCGACTATCCGATCTCGATCCCCGATGTCATTTCGGTCCTGCTCGGCAATGGCAGCAAGACACAGAACCTGATCGTC
TTCGACCTTCGACTTCCTCGGTCGCTCACCGCGCTCTTCATCGGTATGGCACTCGGCATTGCCGGTGCGGTCACCCAGAC
GATTGCGCGCAATGCCCTCGCCAGCCCCGACATCCTCGGAATCACGGCTGGATCGAGTGCCGCCGCAGTGGCACTCATCG
TACTCGGCGGGGGTGGCTCGTTCGTGGGACTGCTTGCCACACTGGGGATTCCGTTGGCTGCACTCTGCGGCGGCCTACTG
ACAGCAGTGGTGATCTACGCCTTGGCGTGGCGCAAGGGCGTCGAGGGGTTCCGCCTCATCCTGATCGGTATCGGCATCAA
CGCCATGCTGGTGGCAGCGACGGGATGGCTCCTCATCTCGGCGGACATCAACGACGCTTCTCGCGCACAGGTCTGGCTCA
ACGGTTCACTCAACGGTGCCACCTGGAATCAGATGTGGCCGGTCGCAATCGCCGTCGCAGTAGTCGGCGGCTACGCGGTG
ATCGCATCGTTCACCATGGGAGCGCTGCGGTTGGGCGACGACAACGCAACCTCACTCGGTGTTCGCTTGCAATCATCACA
GGCCAAGTTGTTGCTTTCCGCCGTGGCACTGGCCGCCATCGCGACCGCAGCAGCAGGTCCGGTCGGCTTTGTCGCCCTGG
CTGCGCCACAGGTCGCCATGCGTCTGGTGCGCTCCGCCGGCCCGCCCATCGTGGCTTCCGCGCTGACCGGTGCCGTACTG
GTGGTAGGCAGCGACGTCATCGCTCGAACAATTCTGCCTGTGGAACTCCCCGTCGGAATCGTGACTTCCGCACTGGGCGG
CCCGTTCCTGCTCTACCTGTTGGTTCGTAACAATCGGAAGGTCACAGCATGA

Protein sequence :
MTLKQELRVLPRTVPSRKSIRLGGFSLVYRPLAVSVSIALAVALFLLLCINIGRGDYPISIPDVISVLLGNGSKTQNLIV
FDLRLPRSLTALFIGMALGIAGAVTQTIARNALASPDILGITAGSSAAAVALIVLGGGGSFVGLLATLGIPLAALCGGLL
TAVVIYALAWRKGVEGFRLILIGIGINAMLVAATGWLLISADINDASRAQVWLNGSLNGATWNQMWPVAIAVAVVGGYAV
IASFTMGALRLGDDNATSLGVRLQSSQAKLLLSAVALAAIATAAAGPVGFVALAAPQVAMRLVRSAGPPIVASALTGAVL
VVGSDVIARTILPVELPVGIVTSALGGPFLLYLLVRNNRKVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 1e-43 46
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 5e-32 41
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 9e-32 41
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 9e-32 41
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 9e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_31070 YP_002766554.1 putative iron-siderophore ABC transporter permease protein VFG0928 Protein 5e-33 41