|
Name : tkt (RER_30450) Accession : YP_002766492.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 3259117 - 3261219 bp Length : 2103 bp Strand : - Note : - DNA sequence : GTGTCGATCACAGACGAGATCCACGTCCTCACGCAACCCGTCCACCCCTCGGACTGGACCGACCTGGACACCAAGGCTGT CGATACCGCCCGCGTGCTCGCCGCCGACGCGGTTCAGAAGGTCGGCAACGGCCATCCCGGAACTGCAATGAGCTTGGCGC CGTTGGCATACACCCTCTTTCAGCGCATCATGCGCCACGATCCTTCGGATGCAGAATGGGTCGGCCGTGACCGCTTCGTT CTTTCCTGTGGCCATTCGTCCTTGACGCTGTACACCCAGCTCTACCTCTCGGGCTACGGTCTCGAGCTTGCTGACCTCGA AGCTCTCCGCACGTGGGGCGCACTGACCCCCGGTCACCCCGAGGTCGGCCACACCGTCGGCGTCGAGATGACCACCGGTC CGCTCGGCCAGGGCCTTGCGTCCGCAGTCGGCATGGCCATGGCTGCGCGTCGTGAGCGCGGGCTGTTCGATCCGGAGACC CCGGTCGGCTCCTCCCCCTTCGACCATCACATCTACGTGATCGCGTCCGACGGTGACATCGAGGAAGGCGTCACCTCCGA GGCGTCGTCTCTCGCGGGTGTCCAGGAACTGGGCAACCTGATCGTCTTCTACGACGACAACAAGATCTCCATCGAGCACG ACACCGCCATCGCTCTCGGCGAAGATGTCGGAAAGCGCTACGAGGCGTACGGCTGGCACGTTCAGCACGTCGATGGCGGC GAGAACGTCTCCGGCATCCTCGACGCGGTTGCCGCAGCCAAGGCCGTCGTCGACCGTCCGTCCATCATCTTGCTCCGCAC CATCATCGGTTTCCCGGCGCCGAAGAAGATGAACACCGGCGACGTTCACGGCTCTGCACTCGGTGCCGACGAGGTCGCCG CGGTCAAGGAAGCCCTCGGGTTCGATCCGAGCAAGTCCTTCGACGTCGACGCCGACGCTCTGGCTCACGCCCGTGAGGTC GTCTCGCGCGGAGCCGACGCACACAAGGCATGGCAGGTCGAGTTCGACGCGTGGGCCGCACGTGAGTCCGAGCGCAAGGA ACTCTTCGACCGCCTGTTCGCCGGTGAGTTCCCTGCCGGCTGGGCCGACGCTCTCCCGACCTACGAGGCCGACGCCAAGG GCGTTGCGACTCGCAAGGCCTCCGGTTCGGCACTCAACGCGCTCGGACCGATCCTGCCCGAACTGTGGGGCGGTTCCGCC GACCTCGCCGGCAGCAACAACACCACCATCAAGGGCGCAGATTCGTTCGGCCCCTTCTCCATCTCCACCAGCGACTGGAC TGCGCAGCCTTACGGCCGCACGCTCCACTTCGGTATCCGTGAGCACGCGATGGGCTCGATTCTCAACGGCATCGCGCTGC ACGGGCCCACCCGTCCGTACGGCGGAACCTTCATGGTCTTCTCCGACTACATGCGTCCGGCGGTTCGCCTGGCTGCACTG ATGAAGACTGCCGTCACCTACGTCTGGACCCACGACTCCATCGGTCTCGGCGAAGACGGCCCGACTCACCAGCCGGTCGA GCACCTCGCTGCTCTTCGTGCGATCCCGAACCTCGCCGTCGTCCGCCCGGGTGACGCCAACGAGACCTCGTTCGCATGGC AGGCAGCACTCGAGAACAAGACTGGCCCGACGGCTCTGGCACTCACCCGCCAGGACATCCCGGTTCTCGAAGGCACCAAG GAGAAGGCTGCCGAAGGCGTCAAGCGCGGCGCTTACGTCCTCGTCGACGCTGCCAACGGTTCGCCCGAGGTCATCTTGCT TGCGACCGGTTCCGAACTGCATCTGGCCACCGAGGCTCGCGAGACCCTCGAAGCTCAGGGCGTCGCAACCCGCGTCGTTT CCGTGCCGTGCCTCGACTGGTTCCTCGAGCAGGATCAGGCGTACCGCGACGAAGTCATTCCGCCCGCCGTCCGCGCACGC GTGTCCGTCGAAGCCGGTATCGCAATGCCGTGGTGGCGCATCCTCGGCGACGCCGGTCAGGCCGTCTCGCTCGAGCATTA CGGCGCTTCCGCCGATTACAAGACCTTGTACCGGGAGTTCGGCATCACCGCCGACGCGACTGTCGAAGCCGCGCAGCGCT CCCTCGCAGCTGTGAAGGGATGA Protein sequence : MSITDEIHVLTQPVHPSDWTDLDTKAVDTARVLAADAVQKVGNGHPGTAMSLAPLAYTLFQRIMRHDPSDAEWVGRDRFV LSCGHSSLTLYTQLYLSGYGLELADLEALRTWGALTPGHPEVGHTVGVEMTTGPLGQGLASAVGMAMAARRERGLFDPET PVGSSPFDHHIYVIASDGDIEEGVTSEASSLAGVQELGNLIVFYDDNKISIEHDTAIALGEDVGKRYEAYGWHVQHVDGG ENVSGILDAVAAAKAVVDRPSIILLRTIIGFPAPKKMNTGDVHGSALGADEVAAVKEALGFDPSKSFDVDADALAHAREV VSRGADAHKAWQVEFDAWAARESERKELFDRLFAGEFPAGWADALPTYEADAKGVATRKASGSALNALGPILPELWGGSA DLAGSNNTTIKGADSFGPFSISTSDWTAQPYGRTLHFGIREHAMGSILNGIALHGPTRPYGGTFMVFSDYMRPAVRLAAL MKTAVTYVWTHDSIGLGEDGPTHQPVEHLAALRAIPNLAVVRPGDANETSFAWQAALENKTGPTALALTRQDIPVLEGTK EKAAEGVKRGAYVLVDAANGSPEVILLATGSELHLATEARETLEAQGVATRVVSVPCLDWFLEQDQAYRDEVIPPAVRAR VSVEAGIAMPWWRILGDAGQAVSLEHYGASADYKTLYREFGITADATVEAAQRSLAAVKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-113 | 45 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-110 | 44 |
