Gene Information

Name : smpB (RER_23120)
Accession : YP_002765759.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 2500122 - 2500595 bp
Length : 474 bp
Strand : +
Note : protein synonym:tmRNA-binding protein

DNA sequence :
GTGAAGGAAAAGGGCCGCAAGGTCATTGCGACCAATCGCAAAGCACGCCACAACTACACGATCATCGACACCTACGAGGC
CGGTATCGCGCTCGTCGGGACCGAGGTCAAGAGTCTGCGTGAAGGCAAGGCGTCGCTCGTCGATGCGTTCGCCACCGTGG
ACAACGGCGAAGTGTGGTTGCGCTCGTTGCACATTCCGGAGTACACGCAAGGCACGTGGAACAACCACTCTCCGCGCCGC
ACCCGAAAGCTCCTGCTGCACAAGCGTGAGATCGAGCACCTCGTCGGCAAGACCCGCGAGGGAAACCAGACACTGGTTCC
GCTGTCGATGTACTTCAACGACGGCAAGGTCAAGGTCGAACTCGCGCTGGCAAAGGGTAAGCAGGACTACGACAAGCGCC
AGGACATGGCCAAGCGGACCGCCGAGCGCGAGGTGACCCGCGAGCTCGGTCGTCGTATCAAGGGCATGCGCTGA

Protein sequence :
MKEKGRKVIATNRKARHNYTIIDTYEAGIALVGTEVKSLREGKASLVDAFATVDNGEVWLRSLHIPEYTQGTWNNHSPRR
TRKLLLHKREIEHLVGKTREGNQTLVPLSMYFNDGKVKVELALAKGKQDYDKRQDMAKRTAEREVTRELGRRIKGMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-54 72
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 6e-33 52