Gene Information

Name : RER_21430 (RER_21430)
Accession : YP_002765590.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2336473 - 2337270 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGCATGCGCACACCACGACGGAACCAGCCGCAGTGCCGGCGATCACTGCCCGCGGTGTCACCAAGGTGTACGGCACCGG
TGAGACCACGGTTCACGCGCTCGGCGGGGTCGACGTGGACTTCGGTCGTGAGCGGTTCACCGCGATCATGGGCCCGTCCG
GCTCCGGAAAGTCGACGCTCATGCACTGTCTGGCCGGGCTCGACACGGTTTCGGGCGGACAGGTTTTCCTGGGCGACACC
GAACTCACGAAACTCGGTGACACGGAACTCACCGAACTTCGACGCGAGCGAATCGGATTCGTCTTCCAAGCGTTCAACCT
GCTGCCGGTGCTCACTGCTCGGGAGAACATGCTGCTGCCGATGAAGCTGGCGGGTAGTGAACCCTCGCCCGAGTGGATGG
ACGAGGTGATCGGGAAACTGGGCCTGTCGAAGCGCCTCGACCACCTGCCGCACGAGTTGTCCGGTGGTCAGCAGCAGCGT
GTAGCTGTCGCCCGCGCACTCCTGCCGCAGCCCGACGTGATCTTTGCCGACGAACCCACCGGAAACCTGGATTCCCGTTC
CGGGACAGAGGTTCTGGGACTCTTGCGCACCAGCGTCCGGGAGACCGGTCAGACGGTCGTCATGGTGACACACGATCCGG
TGGCGGCCTCGTATGCGGACCGAGTCGTGTTGATCGCGGACGGGCGCATCGCCGGAGAGATCGACCATCCCACCGTCGAC
TCGGTGATCGGTGCCATGCGAGCACTCGGTGCCGACGACCTGGCTGATGTTCCTGCAGTTTCGGGTGCACTGCGATGA

Protein sequence : 
MHAHTTTEPAAVPAITARGVTKVYGTGETTVHALGGVDVDFGRERFTAIMGPSGSGKSTLMHCLAGLDTVSGGQVFLGDT
ELTKLGDTELTELRRERIGFVFQAFNLLPVLTARENMLLPMKLAGSEPSPEWMDEVIGKLGLSKRLDHLPHELSGGQQQR
VAVARALLPQPDVIFADEPTGNLDSRSGTEVLGLLRTSVRETGQTVVMVTHDPVAASYADRVVLIADGRIAGEIDHPTVD
SVIGAMRALGADDLADVPAVSGALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-42 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-42 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_21430 YP_002765590.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-37 44
RER_21430 YP_002765590.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-46 44
RER_21430 YP_002765590.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-49 43
RER_21430 YP_002765590.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-45 43