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Name : pdp (RER_20470) Accession : YP_002765494.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2236254 - 2237549 bp Length : 1296 bp Strand : + Note : - DNA sequence : ATGTTTGACGCAGTTTCCATCATCGGCGCCAAGCGTGACGGCCGCGAGTTGTCGGGAACCGAGATCGACTGGATAGTTCA GGCGTTCACTGAGGGGGTCGTCGGCGACGAGCAGATGTCGGCGCTCGCGATGGCGATCTATTTCCGAGGAATGTCACGAG CAGAGACCGGCCGATGGACCGAGGCAATGATCGAATCCGGCGGGAGGATGGACTTTTCGGACTTGCCGCTGCCCACTGTC GACAAGCATTCGACCGGTGGTGTTGGGGACAAGATCACCCTTCCGCTCGCGCCCCTCGTCGCGGCATGTGGTCTTGCAGT CCCGCAGTTGTCGGGACGCGGACTCGGCCACACCGGCGGAACTCTCGACAAGCTCGAGGCCATTCCAGGTTGGCGAGCCG AGCTCACGGCGACGGAGATGGTCGACATTCTCGCGGACCCGAAAATCGGCGCGGTGATCTGCGCTGCCGGAGCGAACCTG GCCCCCGCCGACAAGAAGCTCTACGCGCTGCGCGACGTGACCGGAACGGTGGAATCCATTCCGCTGATCGCAAGTTCGAT CATGAGCAAGAAGATTGCCGAGGGAACCGGCGCCCTGGTGCTCGACGTCAAAGTCGGTTCCGGAGCGTTCATGAAGGACC TCGGCGACGCGCGAGAGTTGGCACGCACGATGGTCGAGTTGGGCAACGACGCCGGCGTGCGTACAAGTGCTCTCATCACC GGGATGGACACCCCGCTGGGATTGACGGCTGGCAACGCTCTCGAGGTGCGTGAATCCGTCGAGGTGCTGGCAGGCGGCGG GCCGTCCGACGTCGTCGAGCTGACCCTGGTCCTGGCTCGGGAGATGCTGTCCGCGGCTGGGATCGACGGTATCGACCCCG CAGACAGACTGGCCGACGGCACGGCCATGGACCGGTGGCGCGCGATGATCGCCGCACAAGGTGGGGACCCACACGCGACG CTGCCGGTGGCCCGGCACAGCGACGTCGTCACCGCGGACCGAGACGGCGTGCTGACCCGACTCGACGCCATGGCGGTGGG CATCGCGGCCTGGAAGCTCGGAGCCGGACGCGAACGACAGGGCGAAGCCGTTCAGGCCGGTGCCGGCATCGAGATGCACG CGAAGCCCGGCGACGTGGTCCGCGCCGGACAGAAGCTGATGACACTGCACACCGACACTCCCGAGAGATTTGATGCTGCG CGGCGGAGCCTCGGCGGAGGCTGGTCGATCGGGGCCGATTCCGACACCGTTTCGCGACCGTTGCTCATCGAGCGAATTGT GGGTGATTCGCGTTAG Protein sequence : MFDAVSIIGAKRDGRELSGTEIDWIVQAFTEGVVGDEQMSALAMAIYFRGMSRAETGRWTEAMIESGGRMDFSDLPLPTV DKHSTGGVGDKITLPLAPLVAACGLAVPQLSGRGLGHTGGTLDKLEAIPGWRAELTATEMVDILADPKIGAVICAAGANL APADKKLYALRDVTGTVESIPLIASSIMSKKIAEGTGALVLDVKVGSGAFMKDLGDARELARTMVELGNDAGVRTSALIT GMDTPLGLTAGNALEVRESVEVLAGGGPSDVVELTLVLAREMLSAAGIDGIDPADRLADGTAMDRWRAMIAAQGGDPHAT LPVARHSDVVTADRDGVLTRLDAMAVGIAAWKLGAGRERQGEAVQAGAGIEMHAKPGDVVRAGQKLMTLHTDTPERFDAA RRSLGGGWSIGADSDTVSRPLLIERIVGDSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-123 | 62 |
