Gene Information

Name : RER_17910 (RER_17910)
Accession : YP_002765238.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG2030
EC number : -
Position : 1925467 - 1925943 bp
Length : 477 bp
Strand : -
Note : -

DNA sequence :
ATGAACGATTCGGCCGCCCTTCACCAACGCACAGTGTTCGCCGAAGATCTCGAGATCGGCCAACTGATCCCATTGGGCTC
GTATTCGGTGACCGAAGAGGAGATCGTCGAGTTCGCAACCCAGTGGGATCCCCAGTGGTTTCACATCGACAAGGAAGCCG
CCGGGTCCGGGGTCTTCGGCGGGTTGATCGCCAGCGGGCTGCACACCCTGTCGATCTGCCAGAAGTTGGTGGTCGCCAGT
CTCTACGACCAGTGGAACGTGATCGCCGGAAAGTCCATGCGCGACGTGAGCTTCCTACGTCCACTTCGCCCCGGTGACAC
CCTGAGCGGAAAGGTCACCGTCGACAACGTCGTGTTCGACAATCGCGCGCGGGGATTGGTCACCATCACAGCGAAATTGG
TCGATGCAGACGGCAATCGCGTTCTCGACGTAGTCACTGACGCCTACCTGCACTGTCGCCCGACTCGCGGACAGTGA

Protein sequence :
MNDSAALHQRTVFAEDLEIGQLIPLGSYSVTEEEIVEFATQWDPQWFHIDKEAAGSGVFGGLIASGLHTLSICQKLVVAS
LYDQWNVIAGKSMRDVSFLRPLRPGDTLSGKVTVDNVVFDNRARGLVTITAKLVDADGNRVLDVVTDAYLHCRPTRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB72133.1 hypothetical protein Not tested Type-IVb SCCmec Protein 4e-16 44
SAPIG0041 YP_005732851.1 MaoC like domain, putative Not tested Type-V SCCmec Protein 5e-16 44
unnamed BAA82222.2 - Not tested Type-II SCCmec Protein 4e-16 44
SAUSA300_0031 YP_492751.1 hypothetical protein Not tested Type-IV SCCmec Protein 5e-16 44
unnamed BAD24825.1 conserved hypothetical protein Not tested Type-V SCCmec Protein 4e-16 44
SERP2522 YP_190063.1 acyl dehydratase MaoC Not tested Type-II SCCmec Protein 5e-16 44
maoC YP_184943.1 MaoC domain-containing protein Not tested Type-I SCCmec Protein 5e-16 44
unnamed ACL99837.1 hypothetical protein Not tested Type-V SCCmec Protein 4e-16 44
SH0090 YP_252005.1 hypothetical protein Not tested SCCmec Protein 5e-16 44
SAR0038 YP_039514.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-16 44
unnamed BAG06198.1 MaoC domain protein dehydratase Not tested Type-VII SCCmec Protein 4e-16 44
unnamed BAA94333.1 hypothetical protein Not tested Type-I SCCmec Protein 4e-16 44
SAMSHR1132_00310 YP_005324555.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 5e-16 44
unnamed BAB47625.1 hypothetical protein Not tested Type-III SCCmec Protein 4e-16 44
MW0030 NP_644845.1 hypothetical protein Not tested Type-IV SCCmec Protein 5e-16 44
unnamed BAC57477.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 4e-16 44
SAV0040 NP_370564.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-16 44
unnamed BAB72114.1 hypothetical protein Not tested Type-IVa SCCmec Protein 4e-16 44
SA0037 NP_373277.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-16 44