Gene Information

Name : RER_11910 (RER_11910)
Accession : YP_002764638.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1322765 - 1323538 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence : 
ATGACACTCGAAGCGGCCGGCGTCAGCTGGCGGGTCGGCGGGGCGCTCATAGTCGACGCCCTCGACGTGTCCCCCACCGT
CGGAAGTACGGTGGGGCTTCTCGGCCCCAACGGTTCGGGAAAATCGACACTGCTGAAACTGCTTGCCGGGCAGAACCGTC
CGACAATCGGGGAGGTGACTCTGGACCGAACTCCGTTGCCTGATTGGAAACGCCGAGATGTCGCGCGTCGGATTGCCACC
GTCGATCAGCACAGCAACACGGAGATCGACCTGACGGTAGCCGAGGTCGTCGAATTGGGACGCACCCCGCACCGCGGATT
GTGGGGCGGGCATTCAGGTTCCGACCGCGACGCCGTCCGCGCGGCGATCGAACACACCAACCTCTCCGGGATGCTCGACC
GGTCGTGGCACACCCTGTCCGGCGGGGAGCGCCAACGCGTGCAGATCGCGCGCGCCCTCGCTCAGGAACCTCACGAGTTG
CTGCTCGACGAACCGACCAATCACCTGGACATCAACCATCAACTCGAATTGCTCGCGCTCGTGCGTCGCCTGCCCACCAC
CACGATCATGGCATTGCACGATCTGAATCTGGCCGCCATGTTCTGCGATTCGATAGTGATGCTGAACCGTGGCTCCATCG
TTGCCCACGGAAGCCCGACCGAGGTCCTCACCGCCGACCTGATAGCCGAGGTCTACCAGGTCGATGCCGAAGTCCGCCTG
GACGGTCCCGGCGGAGTACCCACCGTGAGATACCTTCCACCCAGCTCGGATTAG

Protein sequence : 
MTLEAAGVSWRVGGALIVDALDVSPTVGSTVGLLGPNGSGKSTLLKLLAGQNRPTIGEVTLDRTPLPDWKRRDVARRIAT
VDQHSNTEIDLTVAEVVELGRTPHRGLWGGHSGSDRDAVRAAIEHTNLSGMLDRSWHTLSGGERQRVQIARALAQEPHEL
LLDEPTNHLDINHQLELLALVRRLPTTTIMALHDLNLAAMFCDSIVMLNRGSIVAHGSPTEVLTADLIAEVYQVDAEVRL
DGPGGVPTVRYLPPSSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-41 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-33 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-33 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-33 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_11910 YP_002764638.1 putative ABC transporter ATP-binding protein VFG0925 Protein 1e-29 41