Gene Information

Name : RER_11330 (RER_11330)
Accession : YP_002764580.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1264622 - 1265404 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGAATCGACACTCGGTCCTCGCCCCGCCGGCCCCTGGTGCCACGGCCGCCCGAACATCCGCCGTGCGACTCGAAGG
CGTCAGCAAGATCTACGGCAACGGCCGCGGCGCCGTGACCGCCCTCGACAACATCAGCTTCACCTTGCCGCGCAGCACCT
TCACCGCCGTGATGGGCCCGTCCGGATCGGGCAAGAGCACTTTCCTGCACTGCGCCGCAGGGCTCGATCGACCGAGCAGC
GGATCGGTGTGGCTGGGCGACACCGAGATCTCACAGCTGAAGCCGAAGGCCCGCAGCATCTTCCGTCGCGATCACATCGG
TTTCGTCTTCCAGGCCTACAACCTGCTCGGCGCTCTCGACGTCGAGCAGAACGTCACGCTCCCCCTACTCCTCGCCGGCC
GACGAGCCGACAAGCAGTACCTGACCTTCGTCCTCGAATCCGTCGGACTCGGATCGCACCGCAAGCGCAAACCCTCCGAG
CTGTCCGGCGGTCAGCAGCAACGCGTCGCCATCGCGCGCGCCCTCGTCACTCACCCCGACGCACTCTTTGCCGACGAGCC
GACCGGCGCCCTCGACTCCCGCAGCGCCAAGCAGGTTCTGGAGTTGTTGCGCCGGACAGCCGCCGAGTTCGATCAGACCA
TCGTCATGGTCACGCACGACCCGGTGGCCGCGTCGTACGCCGATCGTGTGCTGTTCCTCGCCGACGGGAAACTGGTCGGG
CACATCGACCGCCCGACGCCGCAGCAGATCGCCGAGCGCATGACACACCTCGGGGACTGGTGA

Protein sequence : 
MKNRHSVLAPPAPGATAARTSAVRLEGVSKIYGNGRGAVTALDNISFTLPRSTFTAVMGPSGSGKSTFLHCAAGLDRPSS
GSVWLGDTEISQLKPKARSIFRRDHIGFVFQAYNLLGALDVEQNVTLPLLLAGRRADKQYLTFVLESVGLGSHRKRKPSE
LSGGQQQRVAIARALVTHPDALFADEPTGALDSRSAKQVLELLRRTAAEFDQTIVMVTHDPVAASYADRVLFLADGKLVG
HIDRPTPQQIAERMTHLGDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-39 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-41 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-41 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-41 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RER_11330 YP_002764580.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-45 48
RER_11330 YP_002764580.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-47 48
RER_11330 YP_002764580.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-38 44
RER_11330 YP_002764580.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-36 42