Gene Information

Name : RER_10980 (RER_10980)
Accession : YP_002764545.1
Strain : Rhodococcus erythropolis PR4
Genome accession: NC_012490
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1222496 - 1223314 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
GTGAGCGCCCGCGCCCTGGCGGTGACCGCGTCCGGAGTCGTTGTCCGCATCGATCGCCGAACCGTCGTCAAGGGCGTCGA
CATCGCGGCGGACGCCGGTGCAGTAGTAGGCGTCGTCGGTCCGAACGGATCGGGCAAGTCGACTTTGTTGCGTGCGCTTG
CCGGTCTCGGACCGATCGCTGACGGTGACGTCCGCGTCGGCGGCGAGTCCGTGCACGCGATGTCCGCGCGTTCGCGGGCC
AAAGCCATTTCTTTTGTGGCGCAGGAAGAGCAGAGTCCCGCCGATTTGTTGGTTCACGAGTACGTGACTCTGGGGCGCAC
GCCACATGCAAAGCCCTGGAGTGTCGGCGGAAAGCACGAGAATGCCGTCGTTGATCGTGCTCTGGGCGAGGTCGGAATGA
TCGAGCACAGGCTCTCTTCGATGGACACGCTTTCCGGCGGCGAGCGTCGGCGGGTATTTCTCGCCCGAGGTCTCGCGCAG
GACGCCGGCGTGCTCATCCTCGACGAGCCGACCAATCATCTCGACATCCGGCATCAACTCGAACTGCTCGATCTGGTCCG
GTCGTTGGACCGGACGGTGATCATGGCACTGCACGACCTCGATTTGGCTGCGGCAGTGTGCGATCGGGTGCTCGTGCTCG
CGGATGGAGTTGCCAGGGCGTTCGGACATCCATCCGACGTACTCACCACCTCGGTGGTGGCAACTGTCTTCGGCGTCGAG
ACTTTCGAGCTCGTGAACCCCGCGACAGGCCGTTCACACCTCGTATTCGAATCACGAAATTCTCAACTACAACAATCATT
TTCGGAGAGTGCACTTTGA

Protein sequence :
MSARALAVTASGVVVRIDRRTVVKGVDIAADAGAVVGVVGPNGSGKSTLLRALAGLGPIADGDVRVGGESVHAMSARSRA
KAISFVAQEEQSPADLLVHEYVTLGRTPHAKPWSVGGKHENAVVDRALGEVGMIEHRLSSMDTLSGGERRRVFLARGLAQ
DAGVLILDEPTNHLDIRHQLELLDLVRSLDRTVIMALHDLDLAAAVCDRVLVLADGVARAFGHPSDVLTTSVVATVFGVE
TFELVNPATGRSHLVFESRNSQLQQSFSESAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-36 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-31 41
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-24 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-24 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-24 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-24 41