Gene Information

Name : GAU_3871 (GAU_3871)
Accession : YP_002763383.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 4563604 - 4565082 bp
Length : 1479 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGATCCGACACAAGCGGCGGCGCAATCCGTCACGACCGACGCCGAACTCTCGCTCCTCGATCAGATCGTCGAGCA
GGGCCGCATGGGCAAAGACGCCGATGCGAAGAGCAAGGGGAAGGACCTCGTCAAGCGCTTCGTCAGTGAAGTGCTCGAGG
GCTCCATCACGATCAATCGCGACACCGAGACGATGATCAATGCGCGTATCGCGCAGATCGATCATCTCCTCTCGCTGCAG
CTCAACGAGATCCTGCATCACCCCGAGTTTCAGCGCCTGGAGTCGTCGTGGCGCGGGCTGCAGTATCTGATCAAGAATTC
CGAGACGGGCACGATGTTGAAGGTGAAGGTGCTCAACGTCTCGAAGAAGGATCTGCTGCGTGACCTGCAGCGTGCGCCGG
AATTCGATCAGAGCGCGCTGTTCAAGAAGATCTACGAAGAAGAGTACGGCGTCTTCGGCGGCACGCCCTTCGGCGCGATG
GTCGGCGACTACTACTTCGACAAGAGCGGCCAGGACATCGAACTGCTCGAGAAGATCTCCAACGTGGCCGCGGCCGCGCA
CGCGCCGTTCATCAGCGCGGCGTCGAACGAAATGTTCAATCTCGAAAGCTGGTCCGATCTCGACACGCCGCGCGATCTGG
CCAAGATCTTCGACAGCACCGAATACGCCCGCTGGAAAGGCTTCCGCGCCAGCGAAGATTCGCGGTATGTGGCACTCACC
GCGCCCCGCATCCTGGTGCGCGAGCCCTACGGCGCGTCCACGGTGCCCGTCGAAGCGTTCAACTATGAAGAGCGCGTCGA
CGGCACGAACCACGATCACTACTGCTGGGGCAACGCCGCGTTTGCGATGGCCGCCAACATCAACAAGGCCTTCGCGATGT
ACGGCTGGTGTGCGTCCATCCGTGGCGTGGAAGGTGGTGGTCTCGTCGAAGGTCTGCCGGTGCACAACTTCCGCACCGAG
TCGGGCGAAATCGCGATGAAGTGTCCGACAGAAGTACAGATCACCGATCGCCGCGAGAAGGAGCTGGCCGACCTCGGCTT
TGCCCCGCTCGTGCACCAGAAGGGCACGGCCAACGCCGCCTTCTTCTCCGTGCAGTCGGCGCAGAAGCCCAAGACGTACG
ACGACCCGAAGGCCTCGGCCGCCGCGCGCCTCTCGGCCCAGTTGCCGTACATCTTCGCCACGTCCCGGTTCGCGCATTAC
CTCAAGGTGATGATGCGCGACAAGATCGGCGGGTACACGTCCCGTGCAGAAATCGATGTGTTCCTGAATCGCTGGATTCA
GAACTACATCGCCCTCGAAGATGCCGGTGCCTCGATCAAGGCCCGCAAGCCGCTGTCGGAAGCGCGTATCGATGTCGTGG
AAGTGCCGGGCAAGCCGGGTGCCTACCGCGCGGTCGCCTTCCTCAAGCCGCACTACCAGCTGGACGAACTCGCGGTGTCC
ATGCGCTTGGTGGCCGACCTGCCGCAACCGGCCAAGTAA

Protein sequence :
MADPTQAAAQSVTTDAELSLLDQIVEQGRMGKDADAKSKGKDLVKRFVSEVLEGSITINRDTETMINARIAQIDHLLSLQ
LNEILHHPEFQRLESSWRGLQYLIKNSETGTMLKVKVLNVSKKDLLRDLQRAPEFDQSALFKKIYEEEYGVFGGTPFGAM
VGDYYFDKSGQDIELLEKISNVAAAAHAPFISAASNEMFNLESWSDLDTPRDLAKIFDSTEYARWKGFRASEDSRYVALT
APRILVREPYGASTVPVEAFNYEERVDGTNHDHYCWGNAAFAMAANINKAFAMYGWCASIRGVEGGGLVEGLPVHNFRTE
SGEIAMKCPTEVQITDRREKELADLGFAPLVHQKGTANAAFFSVQSAQKPKTYDDPKASAAARLSAQLPYIFATSRFAHY
LKVMMRDKIGGYTSRAEIDVFLNRWIQNYIALEDAGASIKARKPLSEARIDVVEVPGKPGAYRAVAFLKPHYQLDELAVS
MRLVADLPQPAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-83 42
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 4e-83 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_3871 YP_002763383.1 hypothetical protein VFG2070 Protein 8e-108 53
GAU_3871 YP_002763383.1 hypothetical protein VFG2475 Protein 6e-90 42
GAU_3871 YP_002763383.1 hypothetical protein VFG2093 Protein 2e-84 41