Gene Information

Name : metB (GAU_3167)
Accession : YP_002762679.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Unknown
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 3738199 - 3739383 bp
Length : 1185 bp
Strand : +
Note : protein synonym: CGS

DNA sequence :
TTGCCCGAGGCCATCAGTGCCCCGTCCCGCCGCACGCGTGCCGTGCGGGTCGGGATCGACACTGACGTAGCCCATGGCGC
CGTGGTGCCGCCATTGCATCTCTCGTCGAACTTCTCGTTCGCGGCCTTCGGAGAGAAGCGCCCGTTCGACTACACGCGCA
GCGGCAATCCCACGCGGCAGATTCTCGCCGACGCGCTGGCCGAACTCGAAGAAGGACATGGCGCCGTCGTGACGTCCAGC
GGCATGTCGGCCGTCACACTGGTCCTGCAACTCGTGCCAGCGGGCGGTAGCATCGTGTGCGCGCACGATTGTTACGGCGG
CACCTGGCGCCTGCTGCAGTCGCTGGCCACACGGGGGCTTTTCACCCTGCATCTGGTCGACCTCACGCAGGACAGCGCGG
TGGCACGCATCGAGGCGCTCGCTCCGTCGCTGGTGTGGATCGAAACGCCCAGCAACCCGCTGCTGCGCATCACCGACGTG
CGAACGATCTGTGCCGCCGCGCAGCGCGCCGGCGCGCTCAGTGTCGTGGACAACACCTTCCTGTCACCGGCCCTGCAACG
CCCGCTGACACTCGGTGCCGACATCGTGGTGCACTCCACCACCAAGTACCTGAATGGTCACAGCGATGTCGTGGGCGGTG
CCGTCATTGCGCGCAACGAACAAATCATCGAACAACTGTCCTTCTGGGCCAACTGCCTGGGTGTCACCGGCGCCCCATTC
GACAGCTATCTCACGCTCCGCGGGGTGCGCACGCTGTATCCCCGACTGGCGCTGCATGAGGCCAACGCGCAACTGATCGC
GGAAGCCCTGGATGGCCATCCGGCCGTGCGTGCGGTGCACTATCCGGGCCTGCGCTCACACCCTGGACATGCACTTGCCG
CGTCACAACAGGATGGCTTTGGCGCGATGCTGAGTTTCGAACTGGCGGGCGGATCGGACGCGGTGCGCGCACTCACGGCA
TCGTTGCGCTGTTTCACGCTGGCCGAATCGCTGGGCGGAGTGGAGAGCCTCATCGCTCACCCGGCCACCATGACACATGC
CTCCATGGCACCGGAGGCCCGTGCCGTGGCGGGCATCACCGACGGTCTCGTGCGCCTGTCGGTGGGGATCGAACACGGGG
AAGATCTGCGTGACGATCTGCTCTCTGGTCTCGATCGTGTGCTCAATACGGGCTGGGCGCGCTGA

Protein sequence :
MPEAISAPSRRTRAVRVGIDTDVAHGAVVPPLHLSSNFSFAAFGEKRPFDYTRSGNPTRQILADALAELEEGHGAVVTSS
GMSAVTLVLQLVPAGGSIVCAHDCYGGTWRLLQSLATRGLFTLHLVDLTQDSAVARIEALAPSLVWIETPSNPLLRITDV
RTICAAAQRAGALSVVDNTFLSPALQRPLTLGADIVVHSTTKYLNGHSDVVGGAVIARNEQIIEQLSFWANCLGVTGAPF
DSYLTLRGVRTLYPRLALHEANAQLIAEALDGHPAVRAVHYPGLRSHPGHALAASQQDGFGAMLSFELAGGSDAVRALTA
SLRCFTLAESLGGVESLIAHPATMTHASMAPEARAVAGITDGLVRLSVGIEHGEDLRDDLLSGLDRVLNTGWAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-47 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-61 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-63 41