Gene Information

Name : GAU_3078 (GAU_3078)
Accession : YP_002762590.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3616850 - 3617572 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
ATGACGACCACTTCCACGTCGCAGTCCACCCCGCTCATTCACATGCGCAACATCCGCAAGGTGTTTCATACGGATGAAGT
GGAAACGCATGCGTTGTCGGACGTGCATTTCGACATTCGCAAGGGTGAGTACGTGGCCATCGCCGGTCCATCGGGTTGCG
GCAAGACCACGCTGCTTTCCATTCTGGGTTTGCTCGATGCGCCGAGCAGTGGGGAATACCACATTGCCGGGACGCCGGTG
GGGAATCTGGCGGCCGCAGATCGGGCCCGTGTCCGCAACAAGGAGATCGGCTTCATCTTCCAGGCGTTCAACCTCATCGG
GGACCTGACTGTGTGGGAGAACGTGGAGTTGCCGCTCACCTATCGCGACATGGAAGCGAACGAACGCAAGGAACGGGTGC
AGCGGGCGCTCGAGCGGGTCGGCATGACGCATCGCGCGAAACACTTTCCCGCGCAACTCTCGGGTGGTCAGCAGCAGCGT
GTGGCCGTTGCCCGTGCAGTGGCAGGCGATCCGGCCATTCTGCTGGCTGACGAACCCACCGGCAATCTCGATTCCCGCAA
CGGTGAAGCCGTGATGGAGCTGCTGCGTGAATTGCATGCGGGTGGTGCCACCGTGTGCATGGTGACACACGATGCACGGT
ACGCGCAGCATGCCGAGCGTTCAGTGCAGCTCTTCGACGGTCGTGTCGTCGAGGGCTCCGAAGCCACCGTGCAGACCGCT
TGA

Protein sequence : 
MTTTSTSQSTPLIHMRNIRKVFHTDEVETHALSDVHFDIRKGEYVAIAGPSGCGKTTLLSILGLLDAPSSGEYHIAGTPV
GNLAAADRARVRNKEIGFIFQAFNLIGDLTVWENVELPLTYRDMEANERKERVQRALERVGMTHRAKHFPAQLSGGQQQR
VAVARAVAGDPAILLADEPTGNLDSRNGEAVMELLRELHAGGATVCMVTHDARYAQHAERSVQLFDGRVVEGSEATVQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-26 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_3078 YP_002762590.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-38 50
GAU_3078 YP_002762590.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-45 44
GAU_3078 YP_002762590.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-31 42
GAU_3078 YP_002762590.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_3078 YP_002762590.1 putative ABC transporter ATP-binding protein VFG2059 Protein 1e-08 41