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Name : gabD (GAU_2899) Accession : YP_002762411.1 Strain : Gemmatimonas aurantiaca T-27 Genome accession: NC_012489 Putative virulence/resistance : Unknown Product : NADP(+)-dependent succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3407679 - 3409136 bp Length : 1458 bp Strand : - Note : protein synonym: SSDH DNA sequence : ATGGCTACCTCCGAGTTCGCGCAGTTTCCGTTCTATCGCACGCAGGCCTTTGTGAATGGTGCGTGGGTGGATGCCGATGA TGCATCCACGTTTGCCGTGCACAGTCCATCCACCGGCGTACACCTGGCGGATGTACCCAACATGGGACGTGCGGAAACGC GTCGTGCGATTGAAGGGGCATCGGCGGCGTGGCCGGCATGGCGCGCGATGACGGCCAAGGAACGTGGGGCACTGCTGCGG GAGTGGTTCACGCGCATCATGGCACATCGCGACACGCTGGCTCGTCTCATGAGTCAGGAGTCGGGCAAGGTGATCACCGA GAGTCTGGGTGAGGTCACCTATGGTGCGTCGTTCGTGGAGTGGTTCGCCGAGGAAGCGAAGCGGGCGTATGGCGACGTGA TTCCGGCGCACACCCGCGATCGGCGGTTGGTGGTGATCAAGCAGCCGGTGGGTGTGGTGGCGGCGATCACCCCGTGGAAC TTCCCGTTGGCCATGATCACGCGGAAGGTGGCACCGGCACTCGCCGCTGGATGCCCTGTGGTGATCAAGCCACCCGCCGA AACACCACTCACGGCGCTGGCGCTGGCGGCACTCGCCGAGGAGGCGGGTATTCCCGCTGGCGTGTTGAGCGTGGTGACCA CCAATCATTCTTCTGAGGTGGGGCTCGAGCTGTGCGAGAACCCGCTGGTGCGGAAGCTGTCGTTCACGGGCTCCACGGGT GTGGGCCGCACACTCATGGCGCAGTGCGCGAACAATCTCACCAAGCTGTCGCTGGAGTTGGGTGGCAACGCACCGTTTCT GGTGTTCGATGATGCCGATCTCGACGCCGCCGTGCGTGGGGCGCTGGCCGCCAAGTACCGTCACAATGGTCAGACGTGTG TGTGCGTGAATCGCATTCTGGTGCAGGACGGTGCATACGACGCATTCGTGGAGCGTTTCGCGGCGGCTGTGGGTGGCCTG CGCACGGGGGATGTGCTGGACACGCAGGTGCAGGTGGGGCCGCTCATCAACGAGAAGGGTGTCCAGAAGGTGGAAGCCCA CATTGCTGATGCGGTGCAGAAGGGCGCACGCCTCCTGCGCGGCGGGCATCGGAAGGAGGGGCTCTATTTCGAGCCCACCG TGCTGGCTGATGCCACGACCGATATGCGTATTGCCCGTGAAGAAGTGTTTGGCCCGGTGGCACCCATCTTCCGTTTCACA AGCGAAGACGAGGCGGTGCGTATGGCCAACGACACCGAGTTTGGCCTGGCGGCCTACTTCTACAGCCGCGATGTGGGCCG ATGCTGGCGTGTGTCGGAAGCGCTCGAGTACGGCATGGTGGGTGTGAACGAAGGTCTCATCTCCACCGAGGTGGCGCCCT TCGGCGGAGTGAAAGCCTCAGGCATGGGGCGCGAGGGGTCGAAGTATGGGCTCGACTCGTTCCTCGAGACGAAGTACCTC TGCTACGGCGGCATTTGA Protein sequence : MATSEFAQFPFYRTQAFVNGAWVDADDASTFAVHSPSTGVHLADVPNMGRAETRRAIEGASAAWPAWRAMTAKERGALLR EWFTRIMAHRDTLARLMSQESGKVITESLGEVTYGASFVEWFAEEAKRAYGDVIPAHTRDRRLVVIKQPVGVVAAITPWN FPLAMITRKVAPALAAGCPVVIKPPAETPLTALALAALAEEAGIPAGVLSVVTTNHSSEVGLELCENPLVRKLSFTGSTG VGRTLMAQCANNLTKLSLELGGNAPFLVFDDADLDAAVRGALAAKYRHNGQTCVCVNRILVQDGAYDAFVERFAAAVGGL RTGDVLDTQVQVGPLINEKGVQKVEAHIADAVQKGARLLRGGHRKEGLYFEPTVLADATTDMRIAREEVFGPVAPIFRFT SEDEAVRMANDTEFGLAAYFYSRDVGRCWRVSEALEYGMVGVNEGLISTEVAPFGGVKASGMGREGSKYGLDSFLETKYL CYGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-140 | 65 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-69 | 41 |
