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Name : kdpB (GAU_2891) Accession : YP_002762403.1 Strain : Gemmatimonas aurantiaca T-27 Genome accession: NC_012489 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 3400031 - 3402097 bp Length : 2067 bp Strand : + Note : - DNA sequence : ATGACCACCACATCGCGCCCCCTCCTTGATGGGGCCATCGTACGCCGGGCCATGAGTGAGTCAGTGCGCAAGCTCGATCC GCGCCAGATGGTGCGCAACCCGGTGATGTTCGTGGTGCTGCTGGGCTGTGTGCTCACGACGATCACTCTGTTGCTCGACA TCAGCCGGGGGGCATCCGACATCGGCTTCACGCTGCAGCTCACGCTGTGGCTCTGGTTCACGGTGCTGTTCGCCAACTTC GCCGAAGCCATGGCGGAAGGACGTGGCAAAGCGCAGGCCGACAGTCTGCGTGCGGCACGCTCCGATGTGCAGGCCAAGCA GCTCGACGCCTCTGACGGCGATGGAGATATCGACATCAAGGCATTCGAGTTGGTGTCGGCCAATGCGCTGCGTCGTGGTG CGCTGGTGGTGTGTTTTCCGGGCGATGTGATCCCGAGCGACGGCGAAGTGATCATCGGCGTGGCGTCGGTGGATGAATCG GCCATCACCGGTGAAAGTGCACCGGTCATTCGCGAAAGTGGCGGCGACCGTTCGGCCGTCACCGGCGGCACCAAGGTGCT CTCCGATTATCTCGTGATTCGCATCGGCGCCAATCCGGGCGAAACGTTCATCGATCGCATGATCGCCCTGGTGGAAGGCG CATCGCGGCAAAAGACTCCCAACGAAATTGCGCTCACCATTCTGCTGGTGGGGCTCACCGTGGTGTTTCTGTTGGCGGTG ATCGCCCTCGAACCACTGGCCCGCTACAGCGGCGCCTCGGTGTCCATTCCCGTGCTGGTGGCGCTACTGGTGTGCCTCAT CCCCACGACTATCGGCGGCCTGTTGTCGGCCATCGGTATTGCGGGCATGGATCGGCTCATCCAGCAGAACGTGGTGGCGA TGAGCGGCCGCGCGGTGGAAGCCGCGGGCGATGTGCACACCCTGCTGCTCGACAAGACTGGCACGATCACGCTGGGCAAT CGCGTGGCCTCGGCGTTTGCCCCGGTGCCGGGTGTGGACGAAGCGTTTCTCGCCGAACGGGCACAACTCGCCTCGCTGGC CGACGAAACGCCGGAAGGCCGCAGTATCGTGGTGCTGGCCAAGGAACGCTTTGGCTTGCGCGGCCAGCAGGTGGCCGATT CGGAGTTTGTGCCGTTCAGCGCCAGCACGCGCATGAGTGGTGTGAACATACATGGCATCGAACTGCGAAAGGGCGCCGCC GACGCGGTGATTCGCTGGGTACGCGAGCATCAGGGCGAGGTGCCGGACGCCCTCGAAGCCCTGGTGGGTGACATCGCGCG CGCCGGTGGCACTCCGTTGGTGGTTGGTGAGCGCACCAACACGGGCTGCCGCGTGCTCGGCGTGATCGCCCTCAAGGACG TCGTGAAGGGTGGCATGCGCGAGCGCTTCGACCGGCTGCGTGCCATGGGCATCCGCACCGTCATGATCACCGGCGACAAT CCACTCACCGCTGCGGCCATCGCCGCCGAAGCGGGCGTGGACGACTACCTCGCTGAAGCGCGCCCCGAAGACAAGATGGC GCTCATCGTGCGCGAGCAGCAGGGCGGGCGGTTGGTGGCCATGGCCGGCGACGGCACCAACGATGCCCCAGCGCTGGCCC AGGCCGATGTGGGTGTGGCCATGAACACGGGCACGCAGGCTGCCAAGGAAGCGGGGAACATGATCGACCTCGACTCCAAT CCCACGAAACTCATCGAGATCGTGGAGATCGGCAAGCAGTTGCTGATGACGCGCGGTGCGCTCACCACGTTTTCCATCTC CAACGATATCGCGAAGTACTTCGCGATCATCCCGGCGATGTTCATCGCGGCATTTCCCGAACTGGCCGTGCTCAACGTCA TGGGACTGCACTCCCGCGAGAGTACCATCCTGGCCTCGGTGATCTTCAACGCGCTCATCATCGTAGCGCTCATCCCGCTG GCACTGCGCGGCGTCACCTACCGTCCCGCCGCGGCCAACATCGTGCTGCGTCGCAACCTGCTCATCTACGGTGTGGGTGG TCTCCTCGTGCCCTTCCTGGGCATCAAGGTCATCGACCTCGCACTCGTGGCGCTGCACCTGGCCTGA Protein sequence : MTTTSRPLLDGAIVRRAMSESVRKLDPRQMVRNPVMFVVLLGCVLTTITLLLDISRGASDIGFTLQLTLWLWFTVLFANF AEAMAEGRGKAQADSLRAARSDVQAKQLDASDGDGDIDIKAFELVSANALRRGALVVCFPGDVIPSDGEVIIGVASVDES AITGESAPVIRESGGDRSAVTGGTKVLSDYLVIRIGANPGETFIDRMIALVEGASRQKTPNEIALTILLVGLTVVFLLAV IALEPLARYSGASVSIPVLVALLVCLIPTTIGGLLSAIGIAGMDRLIQQNVVAMSGRAVEAAGDVHTLLLDKTGTITLGN RVASAFAPVPGVDEAFLAERAQLASLADETPEGRSIVVLAKERFGLRGQQVADSEFVPFSASTRMSGVNIHGIELRKGAA DAVIRWVREHQGEVPDALEALVGDIARAGGTPLVVGERTNTGCRVLGVIALKDVVKGGMRERFDRLRAMGIRTVMITGDN PLTAAAIAAEAGVDDYLAEARPEDKMALIVREQQGGRLVAMAGDGTNDAPALAQADVGVAMNTGTQAAKEAGNMIDLDSN PTKLIEIVEIGKQLLMTRGALTTFSISNDIAKYFAIIPAMFIAAFPELAVLNVMGLHSRESTILASVIFNALIIVALIPL ALRGVTYRPAAANIVLRRNLLIYGVGGLLVPFLGIKVIDLALVALHLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-158 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 9e-159 | 60 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-141 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-141 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-141 | 55 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-141 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-141 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-141 | 55 |
