Gene Information

Name : GAU_2618 (GAU_2618)
Accession : YP_002762130.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3072090 - 3072770 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGCGAGTGCTGCTGGTGGAAGACGACGACACATTGCGCGAGAGTGCAACGGCGTTCCTTCGGGCGTCCGGATTTGCGGT
AGATCCGGCGGGCACGGGGAAGATGGCGCGTTCGCTCGCGGCCGTCAGCCCGTACGATGTCGTCGTGCTCGACATTCGAC
TACCCGATGACGACGGATTTGTGCTGTGCACGGCACTGCGTGCGCGAACACCGGCGCCGCGTGTGTTGATGGCCACGGCG
CGGGATGCGGTCGAAGATCGCATTGCCGGACTCGATCTCGGCGCCGACGACTATCTCGTCAAACCGTATGCGCTGGGCGA
ACTGGTGGCGCGCGTGCGGGCGCTGATGCGTCGACCGGACCATGCCGCCCCCACGCTGCTGCGGGTGGAAGACCTCGTGC
TCGATCCAGCCACGCGTGAGGCCGGTCGCAACGGGCGCGTGATCACCCTCACGACCAAGGAGTTCGCCGTGCTGGAGGTG
CTCATGCGGGCACCCGGCCGGGTGCTGACGCGCGAATTCATCGGCGAACACGCGTGGGACGACAACTTCGATCCGATGAG
CAATGTGATCGATGTGTACATCGCCCGCTTGCGGCGAAAGGTCGATGCCGACGGTGACGTGCCGCTTTTGTCGACGGTGC
GCGGTGCCGGCTATCGGCTCGCCGTGCCGTCGCGCGGCTGA

Protein sequence :
MRVLLVEDDDTLRESATAFLRASGFAVDPAGTGKMARSLAAVSPYDVVVLDIRLPDDDGFVLCTALRARTPAPRVLMATA
RDAVEDRIAGLDLGADDYLVKPYALGELVARVRALMRRPDHAAPTLLRVEDLVLDPATREAGRNGRVITLTTKEFAVLEV
LMRAPGRVLTREFIGEHAWDDNFDPMSNVIDVYIARLRRKVDADGDVPLLSTVRGAGYRLAVPSRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-34 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0083 Protein 2e-42 47
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0125 Protein 7e-38 46
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0197 Protein 6e-41 45
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0111 Protein 1e-42 45
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0638 Protein 9e-34 45
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0347 Protein 2e-38 44
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0487 Protein 7e-33 43
GAU_2618 YP_002762130.1 OmpR family two-component response regulator Y16952.3.orf35.gene. Protein 6e-30 43
GAU_2618 YP_002762130.1 OmpR family two-component response regulator BAC0308 Protein 2e-38 42
GAU_2618 YP_002762130.1 OmpR family two-component response regulator U82965.2.orf14.gene. Protein 6e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_2618 YP_002762130.1 OmpR family two-component response regulator VFG1390 Protein 8e-42 48
GAU_2618 YP_002762130.1 OmpR family two-component response regulator VFG1389 Protein 5e-31 46
GAU_2618 YP_002762130.1 OmpR family two-component response regulator VFG0596 Protein 7e-35 43
GAU_2618 YP_002762130.1 OmpR family two-component response regulator VFG0473 Protein 2e-33 41