Gene Information

Name : GAU_2113 (GAU_2113)
Accession : YP_002761625.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2472211 - 2472999 bp
Length : 789 bp
Strand : +
Note : -

DNA sequence :
GTGGATGCACGATCCGCGCTGCAGGCCGCGACCAGCACCACAGCCGCGCCCCACAGTCCCTGTCCGATCCGTCGAACCTC
TGATTGCCAACGCATGCTTGTTGCCCGTGGCCTTACCAAGGAGTACCTGAGCGGTTCGCAGCCCCTGACGGTGCTGCGCG
ATGTGACCTTCGATGTGCCGGCCGGCGCGTTCGTGTCCATCGTCGGCCCCTCCGGCAGCGGCAAGACTACCCTACTCGGT
CTGCTCGCCGGACTCGATACCCCGTCACGGGGAACAGTGTCCCTCGACGGCGTCGATTTTGGTGTGCTCGATGAAGACCG
GCGCGCCAAACTGCGCGGAGAGAAAGTTGGGTTCGTGTTCCAGAGCTTTCAATTGATCCCGACGCTGACCGCCCTCGAAA
ATGTGCAGGTGCCACTGGAACTGGCCGGCCGCGTGAACGTGCGCGAAGCGGCATCACGGGCCCGTGACCTGCTGGGACGT
GTGGGACTCGGTGATCGGGTGCATCACTTCCCACAGCAGCTCTCGGGCGGCGAACAACAGCGCGTGGCACTGGCACGGGC
CTTCGTGAATGACCCGCGCATCCTGTTTGCCGATGAACCCACCGGCAATCTGGATGGCGCCACGGGTGAACGCATCGTCG
AGCTGCTGCAGGAGCTCAATCGCGAGCGCGGCTGCACCATCGTGCTCGTCACGCACGACGCCTCCCTGGCGGCCCGTACA
CAGCGTACGATCCGTTTGCGCGACGGTGTCATCGTCGAAGACATCCGTCACGACCAGAGCCCGGCATGA

Protein sequence :
MDARSALQAATSTTAAPHSPCPIRRTSDCQRMLVARGLTKEYLSGSQPLTVLRDVTFDVPAGAFVSIVGPSGSGKTTLLG
LLAGLDTPSRGTVSLDGVDFGVLDEDRRAKLRGEKVGFVFQSFQLIPTLTALENVQVPLELAGRVNVREAASRARDLLGR
VGLGDRVHHFPQQLSGGEQQRVALARAFVNDPRILFADEPTGNLDGATGERIVELLQELNRERGCTIVLVTHDASLAART
QRTIRLRDGVIVEDIRHDQSPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_2113 YP_002761625.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-37 47
GAU_2113 YP_002761625.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-32 45
GAU_2113 YP_002761625.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-29 41