|
Name : dnaB (GAU_1686) Accession : YP_002761198.1 Strain : Gemmatimonas aurantiaca T-27 Genome accession: NC_012489 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 2005231 - 2006697 bp Length : 1467 bp Strand : - Note : - DNA sequence : GTGCCCGCCGCGCGCGACCCCTACAAGGAGCGTCGTCCACCCTGGTCCGAAGAGGCCGAGCAGGCCGTGCTGGGCGCCAT GCTGCTCGATGCCGACGCCATCATGCGCGCGTCGGAGCATGTTGACGACACGATGTTCTACCGCGAGGGTCATCGTCGGC TGCACCGGGCCATGATCGCGATCACCGAGCGCGGTGGCGTGGTCGATCCGCTCACGCTGGCCGATGAACTCGAGCGTCGT GGGGAGCTCGAACACGCCGGCGGACGTGAGTATCTCGCGTTCCTGCTCGATGCCGTGCCCACGGTCGCGAATGTGGAGTA CCACGCGCGCATCGTGAAGGAGAAGGCGCTGCTGCGTCGCCTGATCGAAGTGAGCACCGAGGTGGTGCAGGAAGCGTTCG AAGGGCGCATCACGGCCACCGATCTGCTCGACAGCGCCGAGTCACGGATTTTCTCCCTGGGGCAGAGCAAGGAGCGCACC GGCTTTGCGCGCATCAAGGAGCTGCTCTGGCCGGCCATGGAAAAGCTCGAGCTGCTCTCTCAGCGCGATCAGGCCATCAC CGGGGTGCCCACCGGCTTCGTCGAACTCGATCACATGACGTCGGGGTTCCAGCCGGCCGACCTCATCATCGTCGCGGCGC GTCCGTCGATGGGCAAGACGGCGTTCACGCTCAACATCGCGCAGCACTCGGCGATCACGGCCAAGGTGCCGGTGGCGTTT TTCTCGCTCGAAATGAGCAAGGAATCCCTGGTGCAGCGTATGCTGGCGTCGGAAGCGCTGATCGATGCGCAGGCGTTGCG TAAAGGTGGTAGGGCGCTCGATGAATCGATGCCACGTTTGGCGAAGGCCGCTGGTATCCTGAGCCATGCACCGATCTTCA TCGACGATACGCCCGGCATCACGCTGCTCGAAATGCGTGCCAAGTCGCGGCGTCTCAAGGCCGAGCACAATCTCGGGCTC ATCATCGTGGACTACCTGCAGCTCATGACGGGACCGGCCGGCGTGGAAAACCGTCAGCAGGAAGTCTCGCAGATTTCGCG CGGCCTCAAGGCCCTCGCGAAGGAGTTGGGCGTGCCGGTGGTGGCGCTCTCGCAGTTGTCCCGTGCCCCTGAGCAACGGA CCGGCGACGACAAGGGTCGTCCACAGCTCTCCGACCTTCGAGAGTCGGGCGCCATCGAGCAGGACGCCGACGTCATCATG TTCATCTTCCGGCAGGAAGTGTACGCCGAGCGTGATGAGAACGGCCGACTCAAGGACCCGACGCTGGAGGGACGCGCCGA GATCATCATCGGCAAGCAGCGTAACGGCCCGATCGGCAGTGCGCGGCTGTTCTTCCACAAGCAGTACACGCGCTTCGACA ACTTCTCGCCCCGTCAGGCACCACCGGAGTATGGAGACGGCGGCGGCTCGTTCGGCGGACCGAAGCTCGTGCGCGGACCG GATGACTTCAACGGCACTCCGTTCTGA Protein sequence : MPAARDPYKERRPPWSEEAEQAVLGAMLLDADAIMRASEHVDDTMFYREGHRRLHRAMIAITERGGVVDPLTLADELERR GELEHAGGREYLAFLLDAVPTVANVEYHARIVKEKALLRRLIEVSTEVVQEAFEGRITATDLLDSAESRIFSLGQSKERT GFARIKELLWPAMEKLELLSQRDQAITGVPTGFVELDHMTSGFQPADLIIVAARPSMGKTAFTLNIAQHSAITAKVPVAF FSLEMSKESLVQRMLASEALIDAQALRKGGRALDESMPRLAKAAGILSHAPIFIDDTPGITLLEMRAKSRRLKAEHNLGL IIVDYLQLMTGPAGVENRQQEVSQISRGLKALAKELGVPVVALSQLSRAPEQRTGDDKGRPQLSDLRESGAIEQDADVIM FIFRQEVYAERDENGRLKDPTLEGRAEIIIGKQRNGPIGSARLFFHKQYTRFDNFSPRQAPPEYGDGGGSFGGPKLVRGP DDFNGTPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-64 | 42 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-62 | 41 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-62 | 41 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-66 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-62 | 41 |
