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Name : lysS (GAU_1579) Accession : YP_002761091.1 Strain : Gemmatimonas aurantiaca T-27 Genome accession: NC_012489 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1893701 - 1895272 bp Length : 1572 bp Strand : + Note : protein synonym: LysRS; protein synonym: lysine--tRNA ligase DNA sequence : GTGAGCCGCGAACCGCAGTCGCCCGACGAGGGCACGCCCAATTCGTCGGCGGGTGATTCATCGCTCGACGACGCTGGCGC CCAGAAGCAGGAGCTCAACTTCGTCATGAAGGCGCGGCGCGAGAAGCTCGACCGCTTGCGTGCCGCTGGCGTGGAGCCAT TCGCGTATTCGTTCGATCGCTCACACAGCTCGGTCGCGGCTATCGCGGCGCTGGGGGATGCGCAGGAAGGGCCGGAGGTA TCGGTCGCCGGTCGTCTCGTATCGTGGCGCGGGCAGGGCAAGACCGCGTTTGCGCACTTGGTCGATATGGACGGCCGTCT GCAGCTCTACTTCCGCCGAGACGACATGGGCGATGCGGTGTTCGCACAGCTCGCCGAATATGATCTCGGCGACTGGGTGG GCGTGCGCGGCACCATGATCCGCACGCGCACTGGCGAAGCCACGGTGAAGGTCACGCACGTCGAACTGTTGTCCAAGTCC CTGCGTCCGCTGCCCTTGGGCAAGGAGCAGATGGTGGACGGGCAACTCGTACGATACTCGGCGTTCTCCGATACCGAGCA GCGGGCGCGTCAGCGGTATGCCGATCTCGCGGTGCATCCGGAAGTGCGCGCCCTGTTCCGCGCGCGCTCGGTGCTCACGC GCGCCGTACGCAGTCACCTCGATGGCCTGGGGTATCTCGAAGTGGAGACGCCGGTGCTGCAGCCCCTGTACGGTGGCGCC GCGGCACGGCCCTTCGTGACGCATCACAATGCGCTCGATATGCCGCTCTATCTGCGCATTGCCGACGAGCTGTATCTCAA GCGGCTCATCGTGGGCGGTTTCGAGCGGGTGTACGAAATCGGCCACGACTTCCGCAACGAAGGCATCGACCGGACGCACA ATCCGGAGTTCACGATGCTCGAGTTCTACGAGGCGTTTGCCGACTACACCACGATGATGTCGCGCGTGGAGTCGTTGATC ATGGCCGCGGCCGATGCCATTCGTGGCATTCCGGGCGTTGGTGAGAAGATCCCGTCGTTTGTCACGCCGTTTCCGCGCAT CGAGTGGGTGCCGTCGCTGTCGAAGGCGGCAGGCGTGGATGTCATGGCGGTGAGCGATGCCGAACTGCGTGCCCTGGCCG AGCGCATCGGTGTGCAGAAGGTGGCCACGTTGAGCCGCCCCAAGGTGCTCGACGAGATGTTTCAGGCGTTGGTGGAATCG AAGATCGATCAGCCCACGTTTGTGCTCGACTACCCGAAGGAGCTTTCACCGCTGGCCAAGCCCAAGCGGGGCGGCCCGGA CGGGATCACCGAGCGGTTCGAGTTGTTTGCCAAGGGCAAGGAACTGGCCAACGCGTTTTCTGAACTGAACGATCCGATCG ATCAGCGCGAGCGCTTCGAAGCGCAGGCGCGTCTGCGTGACGCGGGTGATGACGAAGCCAGTGGCGTCGACGATGACTAC CTGCGTGCGATGGAGTACGGCATGCCGCCCACGGGTGGCGTGGGCATCGGCATCGATCGGTTGTTCATGTACCTGACGGA TACGCAGAACATTCGCGACGTCATTCTCTTTCCCACGATGCGTCCGGAGTGA Protein sequence : MSREPQSPDEGTPNSSAGDSSLDDAGAQKQELNFVMKARREKLDRLRAAGVEPFAYSFDRSHSSVAAIAALGDAQEGPEV SVAGRLVSWRGQGKTAFAHLVDMDGRLQLYFRRDDMGDAVFAQLAEYDLGDWVGVRGTMIRTRTGEATVKVTHVELLSKS LRPLPLGKEQMVDGQLVRYSAFSDTEQRARQRYADLAVHPEVRALFRARSVLTRAVRSHLDGLGYLEVETPVLQPLYGGA AARPFVTHHNALDMPLYLRIADELYLKRLIVGGFERVYEIGHDFRNEGIDRTHNPEFTMLEFYEAFADYTTMMSRVESLI MAAADAIRGIPGVGEKIPSFVTPFPRIEWVPSLSKAAGVDVMAVSDAELRALAERIGVQKVATLSRPKVLDEMFQALVES KIDQPTFVLDYPKELSPLAKPKRGGPDGITERFELFAKGKELANAFSELNDPIDQRERFEAQARLRDAGDDEASGVDDDY LRAMEYGMPPTGGVGIGIDRLFMYLTDTQNIRDVILFPTMRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-92 | 42 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_002761091.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-92 | 42 |
