Gene Information

Name : GAU_1326 (GAU_1326)
Accession : YP_002760838.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Resistance
Product : copper-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 1585336 - 1587444 bp
Length : 2109 bp
Strand : +
Note : -

DNA sequence :
ATGACCAACCACGACCATCAGCACCACTCCATCGGCGCGGAATCCGGCCATTCCCAGCACTTGCAGGCAGCTGAGGCGGA
ACACGCGGCACGCGTCCCCGGCGGGATGGACGTTCACGCCCATGCGGCGCACGACAAGCACGCTGGCCACTCCGTCGCGA
TGTTCCGCGACAGGTTCTGGGGGACACTCGTGCTCACGCTGCCCACGCTCCTGTGGGGGCACATGCTGCAGTCGGCGCTC
GGGTATACCGCGCCTTCGTTCGAGGGAGCGCACCTCATTCCCGCGCTGTTCGGAACCGCGGTGTTCGCATACGGCGGCAT
TCCATTTCTGCAGGGGGCCATTCGCGAGATCCGGGACCGGCTCCCTGGCATGATGACGCTCATCTCGCTCGCGATTACGG
TGGCATTCGTTTTCAGCGCGGCCGTGTTCGTCGGCTTTCCCGGCATGCCCCTCTGGGAGGAACTGGCGACGCTCGTAACC
ATCATGCTGCTCGGCCATTGGATGGAGATGCGCTCCATCTCACAGGCGCAAGGCGCGCTCGGCGAACTCGCGAAGCTCCT
TCCTGCCACCGCCGTCCGCGTTCACGGGCAGGGCGCCGAAGAGCGGCTCACGGAGGTATCGGTCGACCAGTTGGTGGTCG
GGAACGTGGTGTTGGTGCGCCCCGGAGCGAACGTGCCCGCCGACGGGGTGGTGCGGGCAGGGCGGAGCAGCGTGAACGAG
GCCCTGCTGACCGGAGAGTCGGCACCCGTTGCCAAGGCGGAGGGGGATCGTGTGATCGCCGGCGCGGTGAACGGCTCAGG
GTCACTCCGCGTCGAGATCACCGGTACCGGCGAGCGCACCGCTCTGGCAGGCATCATGCGGCTCGTGGCTCAGGCACAGT
CGTCCCGATCACGCGCACAGGCCCTGGCCGACCGCGCCGCCTTCTGGCTCACTTGGGTGGCGCTCGGCGCGGGGGCTATC
ACGTTCGCGGCGTGGATCGCCACGGGGGCGACGGCCGCGGTAGCGGTGGAGCGACTGGTTACGGTGCTCGTGATCGCGTG
CCCACACGCGCTCGGACTCGCGGTGCCATTGGTGCTGGCCATCTCCACCACGCTCGGAGCGCACGGCGGCCTGCTGGTGC
GCGACCGCCGCGGACTCGAAGAAGCGCGAAATCTCACCACCGTGGTCTTCGACAAGACGGGGACACTCACCCTCGGTGAA
CATCGGGTGGTGGCGATGCGCACTGTGCATGAGATGTCGGAAGATGATGCGCTGCGCCTGGCGGCGGCCGTCGAGCGCGA
CGCCGAACATCCGGTCGCGCGTGCGATTGTGTCGAGTGCGACCGAACGGGGATTGGTAATTCCTGCGGCAACCGGTTTCG
AGCTGATGCCGGGGCTGGGGGTACGCGCCACGGTTGAGGGGCGTGCGATAGCCAACGGGGGACCGAATCTGCTTGCCAGC
CGCAACGTGACGCTCCCGGCCGAACTGCAGCAATTCACTGACGAAGCGTCCGCGCGCGGCGAGGGCGTGGTCTATCTGAT
CGAGGATGTACAGGTGCAGGCGGCCTTCGCCGTCGCCGACGCCGTGCGCCCGGAGTCAGCCGAGGCCATTCGACGCTTGC
ACGAGGCCGGACTGGAAGTCGTGATGATGACCGGTGATGCGCGCGCCGTGGCCGACGCGGTAGGTCGGGAGTTGGGCATC
GACACGGTGCTCGCGCAGGTGCTCCCGGAGGAGAAGGCCAAGCATATTCAGCGCCTCCAGCAACAAGGGAAACGCGTCGC
GATGGTTGGTGATGGCGTGAACGATGCGCCGGCACTCGTCACCGCAGACGTTGGCGTAGCCATCGGTGCCGGCACCGATG
TGGCCGTGGAGGCAGGCGACGTGGTGCTGGTCCGAAGTGATCCGCGCGACGTGCCGCGCATCATCAACCTGTCGCGAGCC
AGCTACCGCAAGATGGTGCAAAACCTGTGGTGGGCCGCCGGCTACAACATCGTGGCCATTCCGCTGGCGGCGGGCGTCCT
CGCGCCGTGGGGCATCGTGCTATCGCCAGCGGTGGGCGCGGTCCTGATGTCGCTCAGCACGATTATCGTCGCCGTGAACG
CACAACTCCTGCGACGCGTCAAGCTGTAA

Protein sequence :
MTNHDHQHHSIGAESGHSQHLQAAEAEHAARVPGGMDVHAHAAHDKHAGHSVAMFRDRFWGTLVLTLPTLLWGHMLQSAL
GYTAPSFEGAHLIPALFGTAVFAYGGIPFLQGAIREIRDRLPGMMTLISLAITVAFVFSAAVFVGFPGMPLWEELATLVT
IMLLGHWMEMRSISQAQGALGELAKLLPATAVRVHGQGAEERLTEVSVDQLVVGNVVLVRPGANVPADGVVRAGRSSVNE
ALLTGESAPVAKAEGDRVIAGAVNGSGSLRVEITGTGERTALAGIMRLVAQAQSSRSRAQALADRAAFWLTWVALGAGAI
TFAAWIATGATAAVAVERLVTVLVIACPHALGLAVPLVLAISTTLGAHGGLLVRDRRGLEEARNLTTVVFDKTGTLTLGE
HRVVAMRTVHEMSEDDALRLAAAVERDAEHPVARAIVSSATERGLVIPAATGFELMPGLGVRATVEGRAIANGGPNLLAS
RNVTLPAELQQFTDEASARGEGVVYLIEDVQVQAAFAVADAVRPESAEAIRRLHEAGLEVVMMTGDARAVADAVGRELGI
DTVLAQVLPEEKAKHIQRLQQQGKRVAMVGDGVNDAPALVTADVGVAIGAGTDVAVEAGDVVLVRSDPRDVPRIINLSRA
SYRKMVQNLWWAAGYNIVAIPLAAGVLAPWGIVLSPAVGAVLMSLSTIIVAVNAQLLRRVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 6e-85 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_1326 YP_002760838.1 copper-transporting ATPase BAC0629 Protein 3e-112 52
GAU_1326 YP_002760838.1 copper-transporting ATPase BAC0383 Protein 6e-89 42
GAU_1326 YP_002760838.1 copper-transporting ATPase BAC0079 Protein 8e-105 42
GAU_1326 YP_002760838.1 copper-transporting ATPase BAC0183 Protein 2e-68 42
GAU_1326 YP_002760838.1 copper-transporting ATPase BAC0101 Protein 1e-74 41