Gene Information

Name : pykA (GAU_1104)
Accession : YP_002760616.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1315625 - 1317025 bp
Length : 1401 bp
Strand : +
Note : -

DNA sequence :
GTGCCGCGCACGAAGATCGTGGGGACGCTTGGACCGGCCAGCAACACGCCCGAGGGCATCCGCGCGCTGATCGATGCCGG
TCTCGATGTGGCCCGCATCAACTTTTCGCACGGCACGCACGAAACACACGAGCGCACCATCAAGGCGGTGCGTGAAGTGG
CCGCGGCGGCGGGCCGCCCCGTGGCCATTCTCGCGGACTTGCAGGGGCCGCGTATCCGCATCGGTGCGCTGCCAGCGCCG
CGTGAGCTCGAAGTGGGTTCGGAAGTGGTGCTGGTACCGGAAGATGTGGCCAGCGGCACCGAGATTCCGATCACGTATGC
GGATCTGCATCACGATGTGAACCCCGGCAATCGGGTGCTCATCAACGATGGCCTGTTCGAACTCGTGGTCACGCGCGTGG
ACAGCCCGCGCGTATGGGCGACTGTGGTGCATGGTGGAACGCTCACCAGCAACAAGGGGATGAATCTCCCCGGCATCGCC
GTGTCGGCACCGTCGCTCACCGAGAAGGATCGCGCCGACCTCGCGTTCGCGGTGTCACACGAGCTGGACATGATCGCGCT
CAGCTTCGTGCGTCGTGCGCAGGATATCGAAGAGCTCCGCGCGCTGATTCCGCGCACCATGCTCATCGTGGCCAAGATCG
AGAAGGACGTGGCCCTCGAGAATATCGAGGAGATCATGCGGGCCACGGATGCCGTCATGGTGGCCCGTGGTGATCTCGGC
GTGGAACTGCCGTTCGAAGAAGTGCCGATTGCGCAGAAGAACATCATCGCGACGGCCAATCGCATGGGCCGCCCGGTGAT
CACGGCCACGCAGATGCTGGAGTCGATGATCGACAATCCGCGCCCCACGCGTGCGGAAGCCAGTGACGTGGCCAACGCCA
TCATCGATGGTACGGACGCCGTGATGTTGTCGGCCGAAACGGCCGCCGGCCACCATCCGCGGCTGGCCGTGGAAGCGATG
CGCCGCATCATCAAGGAAATCGAGATTCATCCGGCCGCTATTCACCCGCGCAAGTTCGAGCGGCGTGTACTGGCCGGTGT
GAACACCGAAGAAGCCATCGCGGCGGCCACGGTCGCGGCGGTACGCATGTTGGATGCACCGCTGGTGGTGGTGTTCACGA
AGAGCGGCTTCACGGCGCGCATCGTGGCGTCTCACCGTCCCAGTGTACCCATTCTGGCGCTCACCGATGAACCGCGGGTG
TGCCGACAGCTCGCGTTGGTGTGGGGTGTGGTACCACGCCTCGTGCCGACGGCGCGTGGCTATGACCACATGGTGGCAAT
GGCGTTGCGCGAAGCACTCGATCTCAACCTCGTCACGAAGGGCGACCGGGTGTTGGTGACCGCCGGTGTGCCGTTCGACG
TGCCCGGGACGACCAATCTGCTCAAGGTCGAAACGGTGTGA

Protein sequence :
MPRTKIVGTLGPASNTPEGIRALIDAGLDVARINFSHGTHETHERTIKAVREVAAAAGRPVAILADLQGPRIRIGALPAP
RELEVGSEVVLVPEDVASGTEIPITYADLHHDVNPGNRVLINDGLFELVVTRVDSPRVWATVVHGGTLTSNKGMNLPGIA
VSAPSLTEKDRADLAFAVSHELDMIALSFVRRAQDIEELRALIPRTMLIVAKIEKDVALENIEEIMRATDAVMVARGDLG
VELPFEEVPIAQKNIIATANRMGRPVITATQMLESMIDNPRPTRAEASDVANAIIDGTDAVMLSAETAAGHHPRLAVEAM
RRIIKEIEIHPAAIHPRKFERRVLAGVNTEEAIAAATVAAVRMLDAPLVVVFTKSGFTARIVASHRPSVPILALTDEPRV
CRQLALVWGVVPRLVPTARGYDHMVAMALREALDLNLVTKGDRVLVTAGVPFDVPGTTNLLKVETV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-71 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-71 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-71 42
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 1e-52 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA YP_002760616.1 pyruvate kinase VFG0479 Protein 9e-72 42