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Name : gspE (GAU_1092) Accession : YP_002760604.1 Strain : Gemmatimonas aurantiaca T-27 Genome accession: NC_012489 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1303613 - 1305166 bp Length : 1554 bp Strand : - Note : - DNA sequence : ATGACACGCCGCTCACCCGTCGTCCGCCGCCGCGTTGAGCGGACCACAGCCCTCATGACCGACGCACGCGATCTGCGCGC CGCCGCGGCCGGGCCACTGGCGCGCCGCTTCCCGGCCCGGTGGCTCGATGAACACGCGGTGTTGCCCCTCGCGCTGGCCG ACGGGGTGGCTCGCGTAGCTGCCACGGGCTTCCTGAGTGTTGCCGTGCGCGATGTGCTGGCCCGGCATCTCGATGCCGAG ATCGAGGTGGTGGTGCACGAAGCCGCGGAAATCCGCGCCGCCTTACTTGCCGCACCGCGGCCATCCGAAGCACCGGCTAC AGCCGAAGCCGCGGATCACGATGTGGCCGCTGACGATCTGCGGGCGATGGCCAGCCGCGAACCTGTCGTACAAGTGGTGA ACGCGCTGCTGGCCGAAGCTGCACGCGCCGGCGCCAGCGACCTGCATTTCGAAAGTACGGCTGATGGTGTGCGGGTGCGC ATGCGTCTGGACGGCGTGTTGCATGATGTGCAGCGTCTGGGGCCAGACTTTCGCGCCGCGGTCATTTCCCGCCTCAAAGT GCTGGCCGAACTCGATATCGCCGAGCGTCGTCTGCCGCAGGACGGTCGCGTGCGGGTGCGAGTTGGGGAGCAATGGTTGG ATGTGCGTGTGTCCACACTACCCGCGCTGCATGGCGAAAGTGTGGTGCTGCGACTGCTCGACGCTGGCGGGCACGATACG GCCGCTCCGCGTTCGTTGGAGAGCCTCGGACTCCATACGTCGCTCCTGGCCCCCTGGCGTGCACTCGTGGCCCGCAGCGC CGGCCTGCTGCTCGTAAGCGGTCCCACGGGGTCGGGGAAAACCACGTCACTCCACGCCTCGCTGCTCGAACGCAGCACCC CCGATGTGAAGGTGGTGTCGGTGGAGGACCCGGTGGAGTACCGCCTCGACAGCGTGGTACAGTTGCCGGCCAACACCCGC GCCGGATTCGGTTTTCCGCAGGCGTTGCGGGCCATCCTGCGTCATGACCCCGACGTGATTCTGGTGGGCGAGATGCGCGA TGCAGAAACAGCGGAGATCGCCGTGCGCGCGGCGCTCACCGGACACCTGGTCCTGAGCACCGTGCACACGACCGATGCGG TGGGCGCCGTGGCGCGCCTGCTGGACATGGGTGTGCCACCGTACCTGCTGACCGGCACGCTGCAGGGTGTCCTGGCCCAG CGTCTCGTGCGGCGAGTGTGCCCGGCCTGCGGTGTCTGGCGGGAGGCGCACGCCGAGGAGCGGCGGATGCTCGATGGATC CATCGAGCGGGTGTTTGCAGGCCGTGGCTGCGCGGCCTGCGCACAAACGGGATATCGCGGACGCATGGCCATCGCAGAAT TGCTCATCGTGTCCGATCGAATGCGAGAGGCTATCGCGCAGTCGGCCACGTCGCGAACGTTGCACGACATTGCCCGTACA GAGGGGATGCAGTTGCTCGCGGCCGATGGCGTGCGCGCCGTGCGGGACGGGCATACGACTCCCGAAGAAGTGCGGCGCGT GGTGAACGTGCTGCATGCGGACATCCCGGCGTGA Protein sequence : MTRRSPVVRRRVERTTALMTDARDLRAAAAGPLARRFPARWLDEHAVLPLALADGVARVAATGFLSVAVRDVLARHLDAE IEVVVHEAAEIRAALLAAPRPSEAPATAEAADHDVAADDLRAMASREPVVQVVNALLAEAARAGASDLHFESTADGVRVR MRLDGVLHDVQRLGPDFRAAVISRLKVLAELDIAERRLPQDGRVRVRVGEQWLDVRVSTLPALHGESVVLRLLDAGGHDT AAPRSLESLGLHTSLLAPWRALVARSAGLLLVSGPTGSGKTTSLHASLLERSTPDVKVVSVEDPVEYRLDSVVQLPANTR AGFGFPQALRAILRHDPDVILVGEMRDAETAEIAVRAALTGHLVLSTVHTTDAVGAVARLLDMGVPPYLLTGTLQGVLAQ RLVRRVCPACGVWREAHAEERRMLDGSIERVFAGRGCAACAQTGYRGRMAIAELLIVSDRMREAIAQSATSRTLHDIART EGMQLLAADGVRAVRDGHTTPEEVRRVVNVLHADIPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-74 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-74 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002760604.1 | general secretion pathway protein E | VFG0182 | Protein | 2e-70 | 48 |
| gspE | YP_002760604.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-65 | 47 |
| gspE | YP_002760604.1 | general secretion pathway protein E | VFG2048 | Protein | 8e-75 | 47 |
| gspE | YP_002760604.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-75 | 46 |
