Gene Information

Name : Lm4b_00662 (Lm4b_00662)
Accession : YP_002757372.1
Strain : Listeria monocytogenes Clip81459
Genome accession: NC_012488
Putative virulence/resistance : Resistance
Product : heavy metal-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 679429 - 681309 bp
Length : 1881 bp
Strand : +
Note : -

DNA sequence :
ATGAAGGAATGGATGAAGCAGAATTGGCAATTTATTACGACGGGTATTAGCGGGATTTTGATTGTGATAGGTTGTTTGGT
CGGCAGTGATGTTGGCGACTTTTGGACAGCGGTTATTTTCCTAAGTGCCTTTGTTATCGGTGGTTTTGAGCAAGCTAAAG
AAGGCATTCAAGCGACTATCAAAACGAAAAAGTTGAATGTGGAGCTCTTAATGATTTTAGCGGCTACCGGTGCATCTATT
ATTGGTTATTGGTTTGAAGGGGCCATACTTATTTTTATTTTCTCGGTTAGTGGCGCTTTAGAAACGTATACGACCAATAA
AAGTAAGCGCGAAATCACGAAATTAATGGCATTTCAACCAGAACGCGCCTTTCGTTTGCTTCCTAATGGAGATTTAGAGG
AAGTGGCTGCAAAGGAGTTACAACTGGATGATATGGTATTCGTTCGGCCAGGAGAAAGTGTTCCAATCGATGGAGTCATT
GTTCGAGGGTCAACCACGTTAAATGAAGCAGCCATTAATGGGGAATCAGTGCCAGCGACGAAAACAGTTGGTGCGGATGT
GTTTGGCGGGACGGTCAATGTAAGCAGCGCCATCACGGTCAAAGTAACGCAAACATTTGATAATACGATTTTTAGTAAGA
TTATTCGTTTAGTAGAATCGGCTCAAAGTGAACCTTCGAAAACCGCTCGCTTTATTGAACGATTTGAGGATGCGTATGTA
AAAGCAGTTCTATTATTTGTGTTAGTAATGATGTTCTTGCCTCATTTTGCTTTAGGGTGGTCTTGGAATGAAACATTTTA
TCGTGCGATGGTTTTGCTAACGGTTGCTTCCCCTTGTGCGCTAGTGGCTTCGGTAACGCCTGCGACTTTAGCGGCAATTT
CGAACGGTGCACGTCACGGGATTTTGTTTAAAGGCGGCGTACACTTGGAAAATTTGCGCGGTGTAAAAGCTGTTGCATTT
GATAAAACTGGGACGCTGACAAATGGTACACCAGAACTGACAGATCGGTTATTTGCTGAAAATGTCGATAAGCAACAAGT
AATCAATGTAGTTGGAGCGATGGAGCGACAATCTTTACATCCGTTAGCTGCGGCAATAACGCAAGACCTAGAGGCAGAAA
TCACCGAAAAGTTAACAGAAATTGAAGTGACGGATGTAGCTGGATGGGGAGTTCAAGCGATTTATCAAGAGGAAAATTGG
CAAGTTGGGAAAGCTGGGTTTGTTGGGAAAGAAGCAGCGGCAGCATTTTCAAATGGTGCATTTGAGCGACTTGCGGGTGA
AGGGAAAACGATTGTTTATGTAGCTAAAGACGGCGTGATTCAGGCTATGTTTGCCCTTAAAGATACATGCCGGCCTGAAG
CCATTCGTACGATTAAGGCACTTCAAGCAAAAGGGATTAAAACCATAATGGTGACGGGAGATAACGAACAAACAGGTGCA
GCGATTCAAGCCGAACTCGGAATGGACTATGTTGTTTCCGGTTGTTTACCTGAGAAAAAAGTGGATGTGTTAAAAGAATT
GTCGGTTACTTATGGCAGTGTGGCAATGGTTGGTGATGGAATTAATGATGCTCCGGCTCTTGCACATGCGGCTGTTGGAA
TTGCAATGGGCGAGGGGACGGACATTGCGATGGAAACAGCAGATGTTGTTTTAATGAAAAATGATTTGGAGAAAATCCCA
TATGCTTACAACCTTTCTGAACGGCTTCACTGGATTACTTGGCAAAATATTTGTTTTGCGATTGCGGTGATTCTTGTTTT
GATAACAGCGAATGTTTTCCAACTAATCAATTTGCCATTTGGCGTTGTGGGGCACGAGGGAAGTACTATTTTAGTTATTC
TAAATGGGCTTAGGCTCCTTCGATCTAATCGGAAAAAGTGA

Protein sequence :
MKEWMKQNWQFITTGISGILIVIGCLVGSDVGDFWTAVIFLSAFVIGGFEQAKEGIQATIKTKKLNVELLMILAATGASI
IGYWFEGAILIFIFSVSGALETYTTNKSKREITKLMAFQPERAFRLLPNGDLEEVAAKELQLDDMVFVRPGESVPIDGVI
VRGSTTLNEAAINGESVPATKTVGADVFGGTVNVSSAITVKVTQTFDNTIFSKIIRLVESAQSEPSKTARFIERFEDAYV
KAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVASPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGVKAVAF
DKTGTLTNGTPELTDRLFAENVDKQQVINVVGAMERQSLHPLAAAITQDLEAEITEKLTEIEVTDVAGWGVQAIYQEENW
QVGKAGFVGKEAAAAFSNGAFERLAGEGKTIVYVAKDGVIQAMFALKDTCRPEAIRTIKALQAKGIKTIMVTGDNEQTGA
AIQAELGMDYVVSGCLPEKKVDVLKELSVTYGSVAMVGDGINDAPALAHAAVGIAMGEGTDIAMETADVVLMKNDLEKIP
YAYNLSERLHWITWQNICFAIAVILVLITANVFQLINLPFGVVGHEGSTILVILNGLRLLRSNRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA YP_005732869.1 cadmium-translocating P-type ATPase Not tested Type-V SCCmec Protein 3e-104 43
SE0062 NP_763617.1 copper-transporting ATPase copA Not tested SCCpbp4 Protein 2e-104 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lm4b_00662 YP_002757372.1 heavy metal-transporting ATPase BAC0092 Protein 2e-111 45