|
Name : Lm4b_00292 (Lm4b_00292) Accession : YP_002757007.1 Strain : Listeria monocytogenes Clip81459 Genome accession: NC_012488 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 294473 - 295612 bp Length : 1140 bp Strand : + Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGGAACGACAAAGAAAAATTCAAATCTTAAAAGACATTGTGAATATTGATTCGACTAATGGGCATGAAGAACAAGTTGC GAACTATTTGCAAAAGTTGTTAGCTGAACACGGTATTGAATCCGAAAAGGTACAATACGACGTAGACAGAGCCAGCCTAG TTAGCGAAATTGGTTCCAGTGACGAGAAAGTTTTGGCGTTTTCAGGGCATATGGATGTCGTTGATGCGGGTGATGTCTCG AAGTGGAAGTTCCCACCTTTTGAAGCAGCAGAGCATGAAGGGAAAATATACGGACGTGGCGCGACGGATATGAAGTCAGG TCTAGCGGCGATGATTATTGCAATGATTGAGCTTCATGAAGAAAAACAAAAACTAAATGGCAAAATTAGATTATTAGCAA CGGTTGGTGAAGAAGTCGGTGAACTTGGAGCCGAACAACTAACGCAAAAAGGTTACGCAGATGATTTAGATGGCTTGATT ATCGGCGAACCGAGTGGACACCGGATTGTTTATGCGCATAAAGGTTCCATTAATTATACCGTTAAATCCACTGGTAAAAA TGCGCATAGTTCGATGCCGGAATTCGGTGTTAATGCGATTGACAACTTGTTGCTATTTTATAATGAAGTAGAAAAATTCG TGAAATCAATTGATGCTACTAACGAAATATTAGGCGATTTTATTCATAATGTCACCGTAATTGATGGTGGAAATCAAGTC AATAGTATCCCTGAAAAAGCGCAACTAAAAGGGAATATTCGCTCGATTCCAGAAATGGATAACGAAACAGTGAAACAAGT GCTAGTGAAGATTATCAATAAGTTAAATAAACAGGAAAATATGAATCTAGAATTAATATTTGATTATGACAAACAACCAG TATTTAGTGATAAAAATTCGGATTTAGTCCACATTGCTAAGAGCGTAGCAAGCGACATTGTCAAAGAAGAAATCCCATTA CTCGGTATTTCCGGAACAACCGATGCAGCAGAATTTACCAAAGCTAAGAAAGAGTTCCCAGTGATTATTTTTGGACCAGG AAACGAAACCCCTCACCAAGTAAACGAAAATGTTTCTATAGAGAATTATTTGGAGATGGTAGATGTTTACAAACGAATTG CCACCGAGTTTTTATCGTGA Protein sequence : MERQRKIQILKDIVNIDSTNGHEEQVANYLQKLLAEHGIESEKVQYDVDRASLVSEIGSSDEKVLAFSGHMDVVDAGDVS KWKFPPFEAAEHEGKIYGRGATDMKSGLAAMIIAMIELHEEKQKLNGKIRLLATVGEEVGELGAEQLTQKGYADDLDGLI IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSIDATNEILGDFIHNVTVIDGGNQV NSIPEKAQLKGNIRSIPEMDNETVKQVLVKIINKLNKQENMNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPL LGISGTTDAAEFTKAKKEFPVIIFGPGNETPHQVNENVSIENYLEMVDVYKRIATEFLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 6e-173 | 97 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 5e-171 | 96 |
