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Name : inlH (Lm4b_00289) Accession : YP_002757004.1 Strain : Listeria monocytogenes Clip81459 Genome accession: NC_012488 Putative virulence/resistance : Virulence Product : internalin H (LPXTG motif) Function : - COG functional category : S : Function unknown COG ID : COG4886 EC number : - Position : 289067 - 290713 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGAAAAAACGATGGAATTCTGTATTTAAACTAGTTTTAATGGTAGCTGCTATTCTCGGTATTAGTCTATATGTAACGAC AAGTCAAGGTGCGGAGGTTCGCGCGGAAAGCATTGCGCAGCCAACCCCAATTAATGTTATTTTCCCTGATCCGGCTCTTG CGAATGCAGTTAAAACAGCGACTGGAAAATCTAATGTAACAGACGCTGTTACGCAAGCAGATTTAGATGGAATAGCTACT TTATCAGCATTTAATACTGGAGTAACAACGATAGAAGGAATACAATACTTAAATAATTTGATAGGGTTAGAACTTAAAGA TAACCAAATAACTGATTTAACTCCTCTTAAAAATTTAACGAAAATAACAGAGCTTGAATTATCTGGAAATCCGTTAAAAA ATGTGAGCGCGATTGCTGGGTTACAAAGCATTAAAACGCTAGATTTAACTTCTACACAAATTACAGATGTGACTCCACTT GCAGGTCTTTCCAATTTGCAGGTATTATATTTGGACCTCAATCAAATAACCAATATAAGTCCGCTCGCAGGACTAACTAA TTTACAATACTTATCAATCGGAAATAACCAAGTAAATGATTTAACCCCACTTGCTAATTTATCTAAACTAACGACTTTAA GAGCTGATGATAATAAAATAAGTGATATTTCGCCACTTGCGAGTTTACCTAACCTTATAGAAGTTCATTTGAAAGATAAT CAAATTAGTGATGTCAGCCCACTTGCTAATTTATCGAACTTATTTATAGTCACTTTAACAAATCAAACAATTACCAACCA ACCCGTGTATTATCAAAATAATCTTGTCGTTCCTAATGTAGTAAAAGGTTCTTCTGGCGCGCCTATTGCACCTGCTACTA TTAGCGACAATGGAACATACGCTAGTCCAAATTTAACATGGAATTTAACTAGTTTTATTAATAATGTTAGCTACACGTTT AACCAATCAGTCGCTTTCAAAAATACAACGGTTCCTTTCAGTGGAACAGTTACCCAACCATTAACAGAAGCTTACACTGC GGTTTTTGATGTGGATGGAAAACAAACAAGTGTGACAGTCGGCGCGAATGAATTAATTAAAGAACCAACAGCACCAACGA AAGAAGGTTACACATTCACAGGCTGGTATGATGCCAAAACTGGCGGGAATAAATGGGATTTCAGCACGGACAAAATGCCA GCAGAAAATATCACATTGTATGCGCAGTTCACGATTAATAGCTATACTGCCACATTTGACAATGATGGAAAAATAACGAC GCAAAAAGTCACTTATCAAAGTCTGTTAGAAGAACCAGCAGCGCCAACGAAAGCAGGTTATACGTTCAAAGGTTGGTACG ATGCTAAAACGGGTGGAACTAAATGGGATTTTGCTACTGGTAAAATGCCGGCGGGAAATATTACACTATATGCCCAATTC ACTAAAAATGATAGCCCAAATCCAAATGATCCAACTCCTAATACCCCAACAGGAAATGGTGATGGTACAAGTAATCCAAG TGATTCAGGCGGTAATACCACACTTCCAACAGCTGGGGACGAAAATACTATGCTTCCAATTTTTATCGGAGTTTTCTTGT TAGGGACAGCAACGCTAATTCTCCGCAAAACAATCAAAGTGAAATAA Protein sequence : MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTATGKSNVTDAVTQADLDGIAT LSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL AGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDN QISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTF NQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMP AENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQF TKNDSPNPNDPTPNTPTGNGDGTSNPSDSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 0.0 | 96 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 0.0 | 95 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 0.0 | 95 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 4e-132 | 70 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 2e-132 | 70 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 5e-133 | 70 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 8e-149 | 61 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 1e-100 | 49 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 6e-101 | 49 |
