Gene Information

Name : Lm4b_02342 (Lm4b_02342)
Accession : YP_002759029.1
Strain : Listeria monocytogenes Clip81459
Genome accession: NC_012488
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2419485 - 2420165 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAACTCTACTATCTTTTGATAAAGTATATAAAGACTACCCGTCCGGCCCTTCAATTATTCATGCACTGAAGGAAAC
AAACTTTGAAGCGAAAAAAGGCGAACTAATCGCGATTGTTGGTCCGAGTGGTTCTGGTAAAAGTACGCTGCTTTCTCTGG
CTGGAGCGCTATTAACACCGACTGGCGGAACGATTTCTATTAACGGAAAATCAGTCGGGAATTTATCTTCCAAAGAACAA
ACTGCTCTTCGTTTAGAAGAAATTGGCTTTATTTTCCAAGCAGCTCACTTAGTTCCTTATTTACACGTAAAAGATCAAAT
CAGCTTTATTGGAAAAATGGCTGGGAAAAGTGCGGCGGAGCTTGAAAAAGATACAGCTTCACTTCTAAGCCAACTTGGCA
TTAGTGATCGCGCAAATTTCTATCCAAAAGATTTATCTGGCGGTCAAAAGCAACGTGTCGCTATTGCTCGTGCGCTTATT
AATCAACCTTCCGTTATTTTAGCCGACGAACCAACTGCGAGTCTTGATACTGAAAGAAGTCGTGAAGTTGTCGAGCTTAT
ACGGAATGAAGTTGTGCAAACAAGCCGAACAGCAATCATGGTAACACATGATGAGCGTATGCTAGATTTAGTCAACCATG
TGTATCGTATGGAAGACGGAATACTTACCCAAGAAAGCTAA

Protein sequence : 
METLLSFDKVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSGSGKSTLLSLAGALLTPTGGTISINGKSVGNLSSKEQ
TALRLEEIGFIFQAAHLVPYLHVKDQISFIGKMAGKSAAELEKDTASLLSQLGISDRANFYPKDLSGGQKQRVAIARALI
NQPSVILADEPTASLDTERSREVVELIRNEVVQTSRTAIMVTHDERMLDLVNHVYRMEDGILTQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-34 48
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lm4b_02342 YP_002759029.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-28 43
Lm4b_02342 YP_002759029.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-26 43