Gene Information

Name : prfA (Lm4b_00197)
Accession : YP_002756936.1
Strain : Listeria monocytogenes Clip81459
Genome accession: NC_012488
Putative virulence/resistance : Virulence
Product : listeriolysin positive regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0664
EC number : -
Position : 200326 - 201039 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGCTCAAGCAGAAGAATTCAAAAAATATTTAGAAACTAACGGGATAAAACCAAAACAATTTCATAAAAAAGAACT
TATTTTTAACCAATGGGATCCACAAGAATATTGTATTTTCCTATATGATGGTATTACAAAGCTTACAAGTATTAGTGAGA
ACGGGACCATCATGAATTTACAATACTATAAAGGTGCTTTCGTTATAATGTCTGGCTTTATCGATACAGAAACATCGGTT
GGCTATTATAATTTAGAAGTCATTAGCGAACAGGCTACCGCATACGTTATCAAAATAAACGAACTAAAAGAACTACTGAG
CAAGAATCTTACGCACTTTTTCTATGTTTTCCAAACCCTACAAAAACAAGTTTCATACAGCCTAGCCAAATTTAATGATT
TTTCGATTAACGGGAAGCTCGGCTCTATTTGCGGTCAACTTTTAATCCTGACCTATGTGTATGGTAAAGAAACTCCTGAT
GGCATCAAGATTACACTGGATAATTTAACAATGCAGGAGTTAGGCTATTCAAGCGGTATCGCACATAGCTCAGCTGTTAG
CAGAATTATTTCTAAATTAAAGCAAGAGAAAGTTATCGTGTATAAAAATTCATGCTTTTATGTACAAAATCTTGATTATC
TCAAAAGATATGCTCCTAAATTAGATGAATGGTTTTATTTAGCATGTCCTGCTACTTGGGGAAAATTAAATTAA

Protein sequence : 
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSV
GYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPD
GIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfA CAA05714.1 PrfA Virulence LIPI-1 Protein 8e-107 100
prfA CAA51231.1 Listeriolysin regulatory protein Virulence LIPI-1 Protein 5e-86 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prfA YP_002756936.1 listeriolysin positive regulatory protein VFG0072 Protein 4e-107 100