Gene Information

Name : fhuC (Lm4b_01979)
Accession : YP_002758672.1
Strain : Listeria monocytogenes Clip81459
Genome accession: NC_012488
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter (ATP-binding protein)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2028857 - 2029681 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGACCTTCATACCGATAACTTACAAATTTCATACGACAAACGAATCATTGTTGATGGTTTAGATATAGCCATTCC
AGCGAATAAAATAACCGCTTTAGTAGGTGCAAATGGCTCAGGGAAATCGACTATTTTAAAAACGATGTCCCGCTTAATGA
AACCTAGCAAAGGCGCTGTGTATTTAGATGGCAAGACGATTCATAGTCAGCCAACGAGAGACGTTGCCAAACAACTAGCT
ATTTTGCCACAAAATCCTTCTGCACCTGATGGTTTAACGGTGTTTGAATTAATTTCTTATGGACGTTCCCCGCATCAAAG
TAGCTTTAAATCGATTACCGCAAAAGATCGCGAAATTATTTTTTGGTCATTGCGCGTGACGAATTTAATGGAGTTAGCGG
ATCGACCAATTGATAGTTTATCAGGTGGACAACGACAGCGTGCATGGATTGCCATGGCGCTTGCCCAAGAAACAGATGTA
CTATTTCTTGATGAACCGACGACCTTTTTAGATATGACGCACCAACTAGATGTACTTAATTTATTGAAACAATTAAATCA
ATCAGAGAACCGCACAATTGTGATGGTTGTTCATGATTTAAATCACGCATCTCGTTACGCTCACCATATGATCGCTATTA
AAGAAGGGAAAGTCATCGCAGAAGGAACACCAACCAATGTCATGACTGAACAAACTTTAGAGGATGTTTTTAATATCAAA
GCAGATATTTTAATTGATCCCCGCAGCGGTGTCCCTCTTTGCCTCCCCTACGAAACTTGCAACGGATGCGAAATTGTAAA
GGAGCTTGATTCCAGTGCCAAATGA

Protein sequence : 
MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKSTILKTMSRLMKPSKGAVYLDGKTIHSQPTRDVAKQLA
ILPQNPSAPDGLTVFELISYGRSPHQSSFKSITAKDREIIFWSLRVTNLMELADRPIDSLSGGQRQRAWIAMALAQETDV
LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKVIAEGTPTNVMTEQTLEDVFNIK
ADILIDPRSGVPLCLPYETCNGCEIVKELDSSAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-59 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-59 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-52 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-53 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-50 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-50 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-50 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-50 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-56 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_002758672.1 ferrichrome ABC transporter (ATP-binding protein) BAC0164 Protein 8e-53 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_002758672.1 ferrichrome ABC transporter (ATP-binding protein) VFG1042 Protein 7e-53 45
fhuC YP_002758672.1 ferrichrome ABC transporter (ATP-binding protein) VFG0925 Protein 5e-57 45