Gene Information

Name : Lm4b_01865 (Lm4b_01865)
Accession : YP_002758559.1
Strain : Listeria monocytogenes Clip81459
Genome accession: NC_012488
Putative virulence/resistance : Resistance
Product : metal cations ABC transporter, ATP-binding proteins
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1911855 - 1912577 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGGAAATTCAAGGTTTAACAATAGCGTATAAACAAAAGGTGGCAATTGATAATGTCACACTTCAAATAGCATCAGGAAA
ACTAACGGGTATTGTTGGTCCAAATGGAGCAGGTAAATCAACCTTATTAAAAGGAATGATGGGACTAATTCCGCGTGAAC
AAGGGCAGGTCACATTGGCTGACAAACCACTTACATATTGGAGAAAGAAAATCGCATACGTACCGCAACGGAGTGAAGTA
GATTTAACTTTCCCAATTACCGTTTTTGATATGGTGTTGCTCGGAACGTATCCAGCGCTCGGATTAATTAAGCGTCCTGG
AAAAAAAGAGAAACAACTCGCATTAGATGCGTTAGAACAAGTAGAAATGACAGGCTTTATGAAAAGACAAATAGGAGAGC
TATCTGGCGGCCAACTGCAACGTGTTTTTATCGCACGAGCACTTGCCCAACATGCGGAAATTTTCTTTTTAGATGAGCCA
TTTGCAGGTATTGATATGACGAGTGAAGCGCTGATTATGCGCCTGTTAAAAAAGCTAAGAGATAATGGGAAAACGATTGT
CGTGGTCCATCATGATTTTCATAAAGTGGCTGCTTACTTCGACGATATCATTTTACTTAATAAGAAGTTAGTCGCGCACG
GTCCAGTGGAGCAAACATTTACAGAAGAGAAAATTCAATTTGCTTACGGTGACGCACCGGTGGCATTTGCGACGGGGGTG
TAA

Protein sequence :
MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTLADKPLTYWRKKIAYVPQRSEV
DLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQTFTEEKIQFAYGDAPVAFATGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-54 51
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-54 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lm4b_01865 YP_002758559.1 metal cations ABC transporter, ATP-binding proteins BAC0400 Protein 6e-61 54
Lm4b_01865 YP_002758559.1 metal cations ABC transporter, ATP-binding proteins BAC0440 Protein 2e-45 41