Gene Information

Name : Lm4b_01692 (Lm4b_01692)
Accession : YP_002758389.1
Strain : Listeria monocytogenes Clip81459
Genome accession: NC_012488
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1721176 - 1722348 bp
Length : 1173 bp
Strand : -
Note : catalyzes the formation of L-homocysteine from cystathionine

DNA sequence :
GTGGCTAATGAATATGCGCAAGATACGGCTGTGATTAAAGCGAGCCTCGGGATTGATAAAGAGACAGGTGCGCTTAATAC
GCCAATTCATTTATCGTCTACTTTCCATCAGCATGACTTTGATAATTATCACGCTTATGATTATGCGAGAAGTGGGAACC
CAACGAGAGAAAAAGTGGAACAAGCGATTGCGGAACTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGGATGGCG
GCTGTTTCTGCAGCGCTCTTTACTCTTTCTAAGGGAGACCATTTTATTATTGCGAAAGATGTGTACGGCGGGACGTTTCG
TTTGGTGGAGCAAGTGTTGCCGCGTTTTGGGATTACGCATACTTTTGTTGATACGACAAATATTGACGAAGTTGCGAAGG
CATTTCAAGCGAATACGAAACTGGTTTACTTGGAAACACCTTCTAATCCGTTGCTGCATGTGACAGATATTCGGACTGTT
GCAAAACTTGCGAAAGCGAATGGGTGTTATACGTTTGTTGATAATACATTTTTGACGCCGTTAATTCAAAAACCGTTAGA
ATTAGGTGCAGACTTGGTTATTCATAGTGCGACGAAATTTCTTGGAGGGCATAGTGATATTTTGGCGGGGCTAATTGTCA
CCAATAATCCTAATCTGGCTGAAGCAGTGTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGAGTGCAGGATTCGTGG
TTGTTATTGCGCGGACTAAAAACACTTTCTGTGCGGATGAAGGCTGGGACGGAAACAGCGGAGAAAATTGCGCTATTTTT
AAATGCGGAGCCAGATGTGGTGGCAGTGCATTATCCGGGGTTACCTTCTCATGCGGGTTATGACATCCAAGTGGAACAGG
CGACAAGTGGCGGGGCCGTTTTATCGTTTGATTTAGGCAGTGAGGAAGCTGTGCGAGAACTAGTAACACATTTGGAATTG
CCGGTATTTTCTGTGAGTTTGGGCGCGGTGGAGAGTATTCTTTCTTACCCGGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAGCGTTTGGCGCAAGGAATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCCGATGACTTGATTG
CTGATTTAAAACAAGCACTTTCTTTCATTAAGAAGGGAAGTGTTGCGAAATGA

Protein sequence :
MANEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMA
AVSAALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDADDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-75 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-76 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-75 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lm4b_01692 YP_002758389.1 cystathionine beta-lyase BAC0207 Protein 1e-54 43