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Name : polA (Lm4b_01576) Accession : YP_002758273.1 Strain : Listeria monocytogenes Clip81459 Genome accession: NC_012488 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1585519 - 1588146 bp Length : 2628 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : GTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCCTTTTATGCTTTACCGCTTTTAAATAATGATAA AGGTGTTTACACAAATGCGGTGTATGGTTTCGCAATGATGTTGATGAATGTACTCGAAAAAGAAAAACCTAGCCATGTGC TCGTTGCATTTGATGCTGGGAAAACAACTTTCAGACATACAACATTTAAAGGTTATAAAGGCGGACGTCAAAAAACCCCA AGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAACTTTTAACGGCGTATGATATCCCGCAATATGAACTTGCCAATTA TGAGGCAGATGATATTATCGGAACATTGACGAAAAAAGCGGAAGCAGACGGAATGGAAGTAGCAATCATTACCGGAGACC GGGACTTAACGCAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAAAAAGGCATAGCCGATATGGAAACCAACACA CCAGAAACACTAAAAGAAAAATACAATCTGACTCCTCAACAAATCATTGATATGAAGGGTTTAATGGGTGATTCCTCCGA TAATATTCCTGGTATTCCAGGCGTTGGTGAAAAAACTGCCTTAAAACTCTTACATGAATTTGGTGGAACGGTGGAAAGTG TGTTAGAGCATGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTACTGGAAAATAAAGAATTAGCTATTTTAAGT AAAGAGTTAGCTACAATCAATGTGGATTCACCGATTGAATGCACGGTCGAAAGCACGAAATACGACGGCTATCAAACAGA AAAAGTTATCCCTTTATTAAAAGAAATGAATTTTACAACACTTTTGAAAAATATCGAGGGAGATACACCAGAAGAAACGA AAGAACTAAAAGAGTTGTCTTTTGAAATCGTAACAGAATTAAAAGAAAAACATTTTGGTGGGAAAACCGCGCTTTATGTG GAGCTAGAAAACGATAATTACCATACAGCTAATTTCATTGGATTAACAGTACATTCTAGCCAAGGGACGTATTTCTTTAC AAAAGAAACAGCCGAAAGTAGTGAGGTATTCCGCAAATGGGTAGAAAGTGATCAAACAAAAGTAGTGTATGATGCGAAGA AAACAATGGTTGCAATGAACCGCATTGGTTTGGCCATTTCTGGTATCACCTTTGATATCATGTTAGCATCTTACTTGCTA AATCCATCTGATTCGATTGATGACTTTACAAGTGTTGCAATACGACATGATTACACAGAAGTAGAAACAGATGAAGCAGT CTACGGAAAAGGTGCTAAACGTAGCACTCCTGAAGAAAGCATTGTTGCGGCACACTTAGCTAGAAAAGCAGTGGCTATTG CTGACTTAGAGAAAAGACTAGTTGATGATTTAGAAGAAAATGAACAACTAGCTTTGATGGAAGACCTTGAGCTACCTCTA ACTTTTGTATTAGCAGAAATGGAAATGCAAGGGGTTAGTGTAGATACAGAACGTCTAGAGAATATGAAAGTGGAGCTAGC GGGTAGACTGAAAACATTGGAAGAGTCGATCCATTCTCTAGCCGGCGAAGAATTCAATATTAATTCACCGAAACAACTAG GTGTGATTTTATTTGAAAAGCTTGGTCTCCCAGCTGTCAAGAAAACAAAAACAGGTTATTCAACGGCTGCCGATGTACTG GAAAGTTTATCTGGTAAACACGCGATTATTGATGAAATTTTGTTATATCGTCAACTTGGTAAAATTCAGTCCACTTATAT CGAAGGGCTGCTTAAAGTGACAGATAAAGAAACACATAAAGTACACACACGTTTCAACCAAACATTAACGCAAACAGGAC GCTTAAGTTCAGTTGATCCGAACTTGCAAAATATCCCTATTCGTTTAGAAGAAGGACGGAAAATTAGACAAGTTTTCGTA CCGAGTAAACCAGGTTGGAAAATGTTTTCAGCCGATTATTCTCAAGTAGAGCTGAGAGTCTTAGCACATATTTCGGAAGA TGAAAATTTAATTTATGCATTTAAGCACGATTATGATATTCATACGAAAACGGCGATGGACGTGTTTCATGTTGAGCAAG ACGAAGTGGATTCATTAATGCGTCGTCAGGCTAAAGCGGTAAACTTTGGTATTGTATATGGAATTAGTGATTATGGGCTT TCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTTATTGATCGTTATTTTGTGAGCTATCCAGCTGTGAAAGA ATATATGCAAGATATCGTTCGTTTTGCGAAAGAAAAAGGCTATGTAGAGACCATTTTACATCGTCGTCGGTATATTCCAG AGATTGTCAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACGGCGATGAACACGCCTATTCAAGGTAGTGCCGCT GATATTATCAAAAAAGCGATGATTCTGATGAGCGAGCGTTTAGTATCTGAAAAATTAGAAGCAAAATTATTACTACAAGT ACACGATGAATTAATCTTCGAGGCGCCTGAAGCTGAAATCGCTAAATTAGAAGAAATTGTCCCAGATGTTATGGAAAATG CAGTAGAGCTTTCTGTACCGCTAAAAGTAGATAGCGCATTTGGTGACACTTGGTACGACGCGAAATAA Protein sequence : MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTP SELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT PETLKEKYNLTPQQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEETKELKELSFEIVTELKEKHFGGKTALYV ELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLL NPSDSIDDFTSVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQLALMEDLELPL TFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEKLGLPAVKKTKTGYSTAADVL ESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFV PSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAA DIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
