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Name : Lm4b_01309 (Lm4b_01309) Accession : YP_002758009.1 Strain : Listeria monocytogenes Clip81459 Genome accession: NC_012488 Putative virulence/resistance : Resistance Product : arsenic efflux pump protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1312903 - 1314198 bp Length : 1296 bp Strand : + Note : - DNA sequence : ATGCAGATTACTTTAGCTATTTTAGTATTTGCCTTCACATTATTTTTTGTGATTTGGCAACCAAGAAAATTATCAATCGG ATGGTCAGCTTGCGGAGGTGCGCTAATTGCCATATTACTTGGCGTCGTCACTTTATCAGATGTCGCAACAGTTACTGGAA TTGTTTGGAATGCGACGCTCGCTTTTATTGCTATTATAATTATTTCATTGATTTTAGATAAAATTGGCTTTTTTGAGTGG GCGGCTTTACATATGGCGCGATTAGCAAGAGGTAATGGGTTATTAATGTTTATTCTTATTTCTATTTTGGGAGCTTTCGT TGCTGCGTTGTTTGCTAATGACGGGGCGGCGCTAATTTTGACACCAATTGTTCTAGCGATGGTGCGAGCGCTGAATTTTG ATGAGAAAAAGGTATTTCCATTTATTATTGCTAGCGGTTTTATAGCAGATACGACGTCCTTGCCGCTCGTAGTTAGTAAT TTAGTCAATATAGTTTCGGCTGATTTTTTCGGTATTAGTTTTTCGCAGTATGCGCTTATTATGTGGATTCCAACGCTTTT CTCTTTAGTTGCGAGTATTTTAATCTTATATTTTTATTTTCGGAAAGCATTACCTAAAAAATATGATATGCGAGTGATTC GAGAGCCAGCTTCTGCAATTAAAGATAAAAAGATGTTTCGTGTTTCTTGGGGAATACTTATCATCCTTGTAGCAGGCTAT TTTTTGAGTAGTTTTTTAGATATTCCAGTGTCATTTATTGCCTTGCTAGTTGCTGTTATCTTTTTGTTAGTCAGTGCAAA AAGTCATGCGGTCTCGACAAAAGCTATTTTAAAAGGAGCACCTTGGAATATTGTGTTTTTCTCGGTTGGTATGTATGTAG TTGTATATGGTTTGCAAAATGTCGGTATCACAAAATTATTATCAGAAGCAATTACATATGTTGCGCACTTTGGTTTATTT GCGGGAACAGTTGGAATGGGATTTATTGCTGCAATACTGTCTTCTGTCATGAATAATTTGCCAACAGTAATGATAAATGC ACTTGCAATCGATCATACGTCATTTACAGGCGTGATGAAAGAAGCGTTAGTCTATGCAAATGTCATTGGTTCTGATTTAG GTCCGAAAATAACACCAATTGGCTCGCTAGCAACTTTACTTTGGCTACATGTTCTAGCGCAGAAAGGGATAAAGATAAGC TGGGGCTCTTATTTCAAAATTGGCATTGTGATTACTATTCCAGTTTTATTCATAACGCTCGTCGGACTATATTTTTCACT GCTTATTTGGAATTAA Protein sequence : MQITLAILVFAFTLFFVIWQPRKLSIGWSACGGALIAILLGVVTLSDVATVTGIVWNATLAFIAIIIISLILDKIGFFEW AALHMARLARGNGLLMFILISILGAFVAALFANDGAALILTPIVLAMVRALNFDEKKVFPFIIASGFIADTTSLPLVVSN LVNIVSADFFGISFSQYALIMWIPTLFSLVASILILYFYFRKALPKKYDMRVIREPASAIKDKKMFRVSWGILIILVAGY FLSSFLDIPVSFIALLVAVIFLLVSAKSHAVSTKAILKGAPWNIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF AGTVGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS WGSYFKIGIVITIPVLFITLVGLYFSLLIWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-124 | 67 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 1e-119 | 66 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 7e-120 | 65 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 1e-98 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lm4b_01309 | YP_002758009.1 | arsenic efflux pump protein | BAC0574 | Protein | 5e-122 | 66 |
| Lm4b_01309 | YP_002758009.1 | arsenic efflux pump protein | BAC0575 | Protein | 6e-121 | 66 |
| Lm4b_01309 | YP_002758009.1 | arsenic efflux pump protein | BAC0576 | Protein | 2e-99 | 58 |
| Lm4b_01309 | YP_002758009.1 | arsenic efflux pump protein | BAC0578 | Protein | 5e-99 | 58 |
| Lm4b_01309 | YP_002758009.1 | arsenic efflux pump protein | BAC0577 | Protein | 6e-99 | 57 |
| Lm4b_01309 | YP_002758009.1 | arsenic efflux pump protein | BAC0031 | Protein | 3e-96 | 56 |
