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Name : rph (Lm4b_01243) Accession : YP_002757945.1 Strain : Listeria monocytogenes Clip81459 Genome accession: NC_012488 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 1245312 - 1246058 bp Length : 747 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAGAGTTGATGGAAGAGAAAGTAATGCATTACGAAATATTGAAGTAACACCAGATTATTTAATGCATCCAGAAGGTTC TGTGCTAATTGCATCAGGAAATACAAAAGTTATCTGTTCTGCAAGTGTAGAAACAAAAGTGCCACCATTTATGCGAGGAG AAGGCCGCGGCTGGATTTCTGCAGAATACTCGATGTTACCACGAGCAACAAACACCCGAAATATCCGTGAATCTTCAAAA GGTAAAGTTACTGGCAGAACAATGGAAATTCAACGTTTAATCGGACGTGCGCTCCGTGCAGTTGTTGATTTAGATGCCCT TGGTGAAAGAACAATTTGGCTCGATTGTGACGTTATCCAAGCAGATGGAGGTACTCGTACAGCTTCTATCACCGGCGCAT TCATCGCGATGGTCATGGCAATCGCCAAACTAGACGAAGCTGTACCATTTGCTAAATTTCCTGTCAAAGATTTTCTAGCA GCAACTAGCGTAGGTGTTTTAGAAGAGGGTGGAACAGTACTTGACCTTAACTACGTAGAAGACAGCGCAGCGCAAGTAGA TATGAATATTATCATGACTGGTAGCGGCGCCTTTGTAGAACTCCAAGGAACTGGCGAAGAAGCTACATTCTCGGAAACAG AACTGGCTGAACTAATTGCCTTAGGTAAAAAAGGAATTAGCGAATTAATCGAAATCCAAAAAGAAACACTCGGAGACAAA GTCACAGCGCGGATTAAAGGAGAATAA Protein sequence : MRVDGRESNALRNIEVTPDYLMHPEGSVLIASGNTKVICSASVETKVPPFMRGEGRGWISAEYSMLPRATNTRNIRESSK GKVTGRTMEIQRLIGRALRAVVDLDALGERTIWLDCDVIQADGGTRTASITGAFIAMVMAIAKLDEAVPFAKFPVKDFLA ATSVGVLEEGGTVLDLNYVEDSAAQVDMNIIMTGSGAFVELQGTGEEATFSETELAELIALGKKGISELIEIQKETLGDK VTARIKGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-56 | 53 |
