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Name : ribD (ACP_3414) Accession : YP_002756409.1 Strain : Acidobacterium capsulatum ATCC 51196 Genome accession: NC_012483 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 3959622 - 3960764 bp Length : 1143 bp Strand : + Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGCTAGCCCCGCAGGGTAGCCCAGCCCCGCAGGGCAACGAAGACCAGCGCTGGATGCAGCGCGCCCTTGCCCTCGCGCG GCTGTCTAAGGCCGTCAGCTCGCCCAACCCCGCCGTGGGCTGCGTACTCGTGCGCGAGGGAGCGCTCGTCGGCGAGGGCT ATCACGACTACAGCCGCAAGGATCACGCCGAAATCGTCGCCCTCAAACAGGCCGGCGATCAGGCGCGCGGAGCCACCGCG TACGTCACACTCGAGCCCTGCTGCCACACCGGCCGCACCGGTCCCTGCACTGAGGCGCTCATCGCTGCCGGAGTGCGCCG CGTCGTCGCGGCCACCGTCGATCCCAACCCCAAAGTCAGCGGCCAGGGCCTTGAGCGCCTGCGCCAGGCCGGCATCGAAA CCACAGCCGGCATCGGCGAGTCCGAAGCCCGCGCGCTCAACGATGCCTTCGCCTGCTCCATGCGCAACGGGCATCCCTTT GTCACGCTCAAGGCCGGCGTCTCGCTCGATGGCCGCATCGCGCCCCGCCCCGGCAGCGTAGAGACCGGCAAGCCATACTT CCTCACCGGGCCGCAGGCGCTCGCCCAGGTGCAGGTCATGCGCCACGAGCACGACGCGTTGCTCACCGGCATCAACACCG TGCTCACTGACGATCCGCAACTCTCTGATCGCACCGGCCTGCCGCGCCGCCGCCCCTTGCTGCGCGTCGTCCTTGACTCG GCGCTGCGTCTGCCGCTTGATTCAAAACTGGTGCGCACCGCGCAGCAGGATGTGCTGGTCTTCTGCTCCTTCGCGCCCAT CGCGCGTCGTCAGGCGCTTGAGAGCATGGGCGTCCGCGTCGAAGAACTGCCCGGCAAAACGCGCGGCCGCATTTCGCTCG ACGAGGTTCTCGGCCGCCTCCATGAGATGCAGATTCTCTCCGTCATGCTTGAGGCAGGTGGCATGGTCAACGCCTCCGCG CTTGCAGATGGACTGATCGACAAGCTCGTGCTCTACTACGCTCCCGTGCTGCTCGGCACCGGCGGCATCTCGCTGGCCGA CGGCATCGAAATGCAGCAGCTCGCACTCCAGCGCCCCGAGTGGACGCAGACCGGGCCCGATCTGCGCTTCAGCGCCTACC TGCGCGACCCCTGGCAGGCGTGA Protein sequence : MLAPQGSPAPQGNEDQRWMQRALALARLSKAVSSPNPAVGCVLVREGALVGEGYHDYSRKDHAEIVALKQAGDQARGATA YVTLEPCCHTGRTGPCTEALIAAGVRRVVAATVDPNPKVSGQGLERLRQAGIETTAGIGESEARALNDAFACSMRNGHPF VTLKAGVSLDGRIAPRPGSVETGKPYFLTGPQALAQVQVMRHEHDALLTGINTVLTDDPQLSDRTGLPRRRPLLRVVLDS ALRLPLDSKLVRTAQQDVLVFCSFAPIARRQALESMGVRVEELPGKTRGRISLDEVLGRLHEMQILSVMLEAGGMVNASA LADGLIDKLVLYYAPVLLGTGGISLADGIEMQQLALQRPEWTQTGPDLRFSAYLRDPWQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-44 | 42 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-44 | 42 |
