Gene Information

Name : yliD (ACP_0335)
Accession : YP_002753478.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Resistance
Product : peptide/opine/nickel ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 394232 - 395092 bp
Length : 861 bp
Strand : -
Note : identified by match to protein family HMM PF00528

DNA sequence : 
TTGGCACAAACCTCTGCATTGTCCGTATGGTCTCGCATGAAGAAGCAGCCGCTCGCCGCCGTTGGGCTGGCGCTGGTGGT
GCTGTTTCTGATTTGCGCGTTGTTTGCTCCCTGGCTTGCGCCCTATAATCCCGCCCACATTGACCTGATGGACCGGCTGG
CCGGGCCGAGCCGCAGCCACTGGTTTGGCACCGATGAGCTGGGGCGAGATATTCTCTCGAGGATTATTTACGGGGCGCGC
ATCTCGCTGGAAGTGGCCAGCTCAGTGGTGGCGCTTTCGCTGCTGCTGGGGCTGATTTTTGGCGGGCTGGCGGGCTTTTA
TGGCGGCGCGCTGGATGTGACGATCAACATTTTTGCGATCAATGCGTTCATGGCGCTGCCGGGGATTCTGCTGGCGATTG
CGTTTGTGGCTTTTCTGGGGCCGGGACTGATCAACCTGGTGCTGGCGCTGGCCATCGGCGGATGGGTGGGTTATGCGCGG
CTGGTGCGCGCGCAGGTGCTGGCGGCGCGGGAGCGCGAGTTTGTGGAAGCGGCCAAGGCGCTGGGGGCGAGCGATCTGCG
CATCTTTATGCGGCACATTCTGCCGAATATTATGCAGCCATTGATTGTGCAGTCGGCCATTGGCATGGCGGGCGCCGTGC
TGGCCGAAGCGACGTTGAGCTTTCTGGGGCTGGGCGTGCCTCCGCCGACGCCAAGCTGGGGCGCGATGCTGAATGATGCG
CGCGCGCACCTGTTTGACGCGCCGCATACGGTGGTCTTCCCTGCTATTGCGGTGATGTGCTGCGTGCTTTCGTTCAATTT
TCTGGGCGATGCGCTGCGGGATTATCTGGACCCGAGAACACGGCTGAGTGTGGGGCTATAG

Protein sequence : 
MAQTSALSVWSRMKKQPLAAVGLALVVLFLICALFAPWLAPYNPAHIDLMDRLAGPSRSHWFGTDELGRDILSRIIYGAR
ISLEVASSVVALSLLLGLIFGGLAGFYGGALDVTINIFAINAFMALPGILLAIAFVAFLGPGLINLVLALAIGGWVGYAR
LVRAQVLAAREREFVEAAKALGASDLRIFMRHILPNIMQPLIVQSAIGMAGAVLAEATLSFLGLGVPPPTPSWGAMLNDA
RAHLFDAPHTVVFPAIAVMCCVLSFNFLGDALRDYLDPRTRLSVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 2e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yliD YP_002753478.1 peptide/opine/nickel ABC transporter permease BAC0272 Protein 1e-29 42